Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 EWSR1-215ENST00000469669 2630 ntTSL 216.1■□□□□ 0.171e-7■■□□□ 12
CSTF2P33240 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.83■□□□□ 0.131e-7■■□□□ 12
CSTF2P33240 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.37■□□□□ 0.051e-7■■□□□ 12
CSTF2P33240 EWSR1-216ENST00000479135 7285 ntTSL 1 (best)10.76□□□□□ -0.691e-7■■□□□ 12
CSTF2P33240 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.249e-7■■□□□ 12
CSTF2P33240 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.58□□□□□ -0.089e-7■■□□□ 12
CSTF2P33240 NOL4L-204ENST00000375677 541 ntTSL 311.54□□□□□ -0.569e-7■■□□□ 12
CSTF2P33240 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.26□□□□□ -1.251e-6■■□□□ 11.9
CSTF2P33240 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.76□□□□□ -1.491e-6■■□□□ 11.9
CSTF2P33240 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.59□□□□□ -1.511e-6■■□□□ 11.9
CSTF2P33240 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.36■■□□□ 1.814e-9■■□□□ 11.9
CSTF2P33240 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23■■□□□ 1.274e-9■■□□□ 11.9
CSTF2P33240 MSANTD2-205ENST00000527140 775 ntTSL 321.04■□□□□ 0.964e-9■■□□□ 11.9
CSTF2P33240 MSANTD2-207ENST00000634413 599 ntTSL 521.04■□□□□ 0.964e-9■■□□□ 11.9
CSTF2P33240 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.474e-9■■□□□ 11.9
CSTF2P33240 EHBP1-213ENST00000462441 332 ntTSL 32.58□□□□□ -22e-6■■□□□ 11.8
CSTF2P33240 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.47■□□□□ 0.712e-6■■□□□ 11.8
CSTF2P33240 DYM-204ENST00000577481 567 ntTSL 517.79■□□□□ 0.442e-6■■□□□ 11.8
CSTF2P33240 DYM-209ENST00000579058 869 ntTSL 317.36■□□□□ 0.372e-6■■□□□ 11.8
CSTF2P33240 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.142e-6■■□□□ 11.8
CSTF2P33240 DYM-202ENST00000418472 961 ntTSL 57.67□□□□□ -1.182e-6■■□□□ 11.8
CSTF2P33240 DYM-208ENST00000578596 560 ntTSL 56.2□□□□□ -1.422e-6■■□□□ 11.8
CSTF2P33240 DYM-218ENST00000583353 554 ntTSL 46.16□□□□□ -1.422e-6■■□□□ 11.8
CSTF2P33240 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.99□□□□□ -1.296e-7■■□□□ 11.8
CSTF2P33240 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.686e-7■■□□□ 11.8
CSTF2P33240 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.776e-7■■□□□ 11.8
CSTF2P33240 CDR2-202ENST00000561630 711 ntTSL 523.38■■□□□ 1.332e-7■■□□□ 11.8
CSTF2P33240 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.962e-7■■□□□ 11.8
CSTF2P33240 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.272e-7■■□□□ 11.8
CSTF2P33240 TACC1-212ENST00000521050 491 ntTSL 1 (best)16.68■□□□□ 0.262e-7■■□□□ 11.8
CSTF2P33240 TACC1-216ENST00000521642 493 ntTSL 1 (best)16.05■□□□□ 0.162e-7■■□□□ 11.8
CSTF2P33240 CDR2-206ENST00000567406 567 ntTSL 415.14■□□□□ 0.012e-7■■□□□ 11.8
CSTF2P33240 CDR2-204ENST00000564542 1056 ntTSL 514.05□□□□□ -0.162e-7■■□□□ 11.8
CSTF2P33240 TACC1-222ENST00000522752 944 ntTSL 1 (best)13.37□□□□□ -0.272e-7■■□□□ 11.8
CSTF2P33240 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC12.29□□□□□ -0.442e-7■■□□□ 11.8
CSTF2P33240 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC12.26□□□□□ -0.452e-7■■□□□ 11.8
CSTF2P33240 TACC1-223ENST00000522904 1724 ntTSL 511.98□□□□□ -0.492e-7■■□□□ 11.8
CSTF2P33240 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.512e-7■■□□□ 11.8
CSTF2P33240 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.532e-7■■□□□ 11.8
CSTF2P33240 TACC1-211ENST00000520973 2564 ntTSL 2 BASIC11.3□□□□□ -0.62e-7■■□□□ 11.8
CSTF2P33240 TACC1-204ENST00000518415 3011 ntTSL 1 (best) BASIC9.66□□□□□ -0.862e-7■■□□□ 11.8
CSTF2P33240 TACC1-226ENST00000523239 519 ntTSL 58.78□□□□□ -12e-7■■□□□ 11.8
CSTF2P33240 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.55□□□□□ -1.042e-7■■□□□ 11.8
CSTF2P33240 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.55□□□□□ -1.042e-7■■□□□ 11.8
CSTF2P33240 TACC1-205ENST00000518809 4116 ntTSL 1 (best)7.95□□□□□ -1.142e-7■■□□□ 11.8
CSTF2P33240 TACC1-217ENST00000521866 1807 ntTSL 57.82□□□□□ -1.162e-7■■□□□ 11.8
CSTF2P33240 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.62■□□□□ 0.891e-6■■□□□ 11.8
CSTF2P33240 ZNF451-209ENST00000502749 790 ntTSL 519.02■□□□□ 0.641e-6■■□□□ 11.8
CSTF2P33240 ZNF451-216ENST00000510483 719 ntTSL 418.93■□□□□ 0.621e-6■■□□□ 11.8
CSTF2P33240 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.181e-6■■□□□ 11.8
CSTF2P33240 ZNF451-207ENST00000444273 3402 ntTSL 1 (best)14.91□□□□□ -0.021e-6■■□□□ 11.8
CSTF2P33240 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.031e-6■■□□□ 11.8
CSTF2P33240 ZNF451-206ENST00000370711 609 ntTSL 413.08□□□□□ -0.321e-6■■□□□ 11.8
CSTF2P33240 ZNF451-211ENST00000504603 561 ntTSL 54.62□□□□□ -1.671e-6■■□□□ 11.8
CSTF2P33240 ZNF451-215ENST00000509251 513 ntTSL 44.05□□□□□ -1.761e-6■■□□□ 11.8
CSTF2P33240 ZNF451-218ENST00000515290 581 ntTSL 43.56□□□□□ -1.841e-6■■□□□ 11.8
CSTF2P33240 ZNF451-214ENST00000509071 477 ntTSL 52.69□□□□□ -1.981e-6■■□□□ 11.8
CSTF2P33240 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.991e-6■■□□□ 11.8
CSTF2P33240 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.571e-6■■□□□ 11.8
CSTF2P33240 ARFRP1-211ENST00000618568 1612 ntTSL 319.65■□□□□ 0.744e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.694e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.08■□□□□ 0.654e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.17■□□□□ 0.54e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.61■□□□□ 0.414e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-205ENST00000610414 1251 ntTSL 217.36■□□□□ 0.374e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.274e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-209ENST00000612772 1375 ntTSL 316.62■□□□□ 0.254e-7■■□□□ 11.7
CSTF2P33240 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.184e-7■■□□□ 11.7
CSTF2P33240 GTF3C2-204ENST00000423998 828 ntTSL 513.46□□□□□ -0.254e-7■■□□□ 11.7
CSTF2P33240 GTF3C2-208ENST00000457748 557 ntTSL 511.97□□□□□ -0.494e-7■■□□□ 11.7
CSTF2P33240 IST1-205ENST00000439924 1841 ntTSL 511.68□□□□□ -0.544e-7■■□□□ 11.7
CSTF2P33240 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.794e-7■■□□□ 11.7
CSTF2P33240 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -14e-7■■□□□ 11.7
CSTF2P33240 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC12.12□□□□□ -0.471e-6■■□□□ 11.7
CSTF2P33240 FAM69A-201ENST00000370310 2574 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.631e-6■■□□□ 11.7
CSTF2P33240 FAM69A-205ENST00000616709 2426 ntTSL 3 BASIC10.66□□□□□ -0.71e-6■■□□□ 11.7
CSTF2P33240 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC9.14□□□□□ -0.951e-6■■□□□ 11.7
CSTF2P33240 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.38■■□□□ 1.972e-7■■□□□ 11.7
CSTF2P33240 ATAT1-210ENST00000479562 691 ntTSL 513.54□□□□□ -0.242e-7■■□□□ 11.7
CSTF2P33240 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.272e-7■■□□□ 11.7
CSTF2P33240 PHF21A-211ENST00000529734 557 ntTSL 413.37□□□□□ -0.272e-7■■□□□ 11.7
CSTF2P33240 ATAT1-209ENST00000471782 1527 ntTSL 1 (best)12.84□□□□□ -0.352e-7■■□□□ 11.7
CSTF2P33240 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC12.2□□□□□ -0.462e-7■■□□□ 11.7
CSTF2P33240 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.642e-7■■□□□ 11.7
CSTF2P33240 ATAT1-207ENST00000462304 400 ntTSL 310.89□□□□□ -0.672e-7■■□□□ 11.7
CSTF2P33240 TMEM161B-213ENST00000514135 2035 ntTSL 2 BASIC10.38□□□□□ -0.752e-7■■□□□ 11.7
CSTF2P33240 TMEM161B-209ENST00000511087 2804 ntTSL 1 (best)8.21□□□□□ -1.092e-7■■□□□ 11.7
CSTF2P33240 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.17□□□□□ -1.12e-7■■□□□ 11.7
CSTF2P33240 ATAT1-208ENST00000468713 1195 ntTSL 37.65□□□□□ -1.182e-7■■□□□ 11.7
CSTF2P33240 PHF21A-218ENST00000532883 1051 ntTSL 56.99□□□□□ -1.292e-7■■□□□ 11.7
CSTF2P33240 ATF7IP2-212ENST00000565450 468 ntTSL 43.84□□□□□ -1.792e-7■■□□□ 11.7
CSTF2P33240 PHF21A-212ENST00000529782 561 ntTSL 43.81□□□□□ -1.82e-7■■□□□ 11.7
CSTF2P33240 TMEM161B-208ENST00000510089 7608 ntTSL 1 (best)3.25□□□□□ -1.892e-7■■□□□ 11.7
CSTF2P33240 PHF21A-203ENST00000524497 555 ntTSL 52.8□□□□□ -1.962e-7■■□□□ 11.7
CSTF2P33240 PHF21A-215ENST00000531959 507 ntTSL 52.7□□□□□ -1.982e-7■■□□□ 11.7
CSTF2P33240 RABGEF1-209ENST00000607882 2654 ntTSL 212.08□□□□□ -0.486e-11■■□□□ 11.7
CSTF2P33240 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.342e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC12.57□□□□□ -0.42e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-204ENST00000449098 1599 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.52e-10■■□□□ 11.7
CSTF2P33240 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC11.67□□□□□ -0.542e-10■■□□□ 11.7
Retrieved 100 of 6,735 protein–RNA pairs in 272.5 ms