Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 BST1YFL025C 3090 nt0.79□□□□□ -2.28
UFD4P33202 YNL054W-BYNL054W-B 5250 nt0.79□□□□□ -2.28
UFD4P33202 snR76snR76 109 nt0.79□□□□□ -2.28
UFD4P33202 YGR026WYGR026W 837 nt0.79□□□□□ -2.28
UFD4P33202 MGE1YOR232W 687 nt0.79□□□□□ -2.28
UFD4P33202 YRO2YBR054W 1035 nt0.79□□□□□ -2.28
UFD4P33202 UBC9YDL064W 474 nt0.78□□□□□ -2.28
UFD4P33202 RRT7YLL030C 342 nt0.78□□□□□ -2.28
UFD4P33202 YOL035CYOL035C 303 nt0.78□□□□□ -2.28
UFD4P33202 LTP1YPR073C 486 nt0.78□□□□□ -2.28
UFD4P33202 MLH3YPL164C 2148 nt0.77□□□□□ -2.29
UFD4P33202 YER107W-AYER107W-A 321 nt0.77□□□□□ -2.29
UFD4P33202 ERD2YBL040C 660 nt0.77□□□□□ -2.29
UFD4P33202 ASI3YNL008C 2031 nt0.76□□□□□ -2.29
UFD4P33202 APC2YLR127C 2562 nt0.76□□□□□ -2.29
UFD4P33202 FSH1YHR049W 732 nt0.76□□□□□ -2.29
UFD4P33202 YMR272W-AYMR272W-A 114 nt0.76□□□□□ -2.29
UFD4P33202 YJR029WYJR029W 5268 nt0.75□□□□□ -2.29
UFD4P33202 YPR137C-BYPR137C-B 5268 nt0.75□□□□□ -2.29
UFD4P33202 YDL026WYDL026W 312 nt0.75□□□□□ -2.29
UFD4P33202 SHR3YDL212W 633 nt0.75□□□□□ -2.29
UFD4P33202 MRP2YPR166C 348 nt0.75□□□□□ -2.29
UFD4P33202 RRP6YOR001W 2202 nt0.75□□□□□ -2.29
UFD4P33202 SLF1YDR515W 1344 nt0.74□□□□□ -2.29
UFD4P33202 UBP11YKR098C 2154 nt0.74□□□□□ -2.29
UFD4P33202 STE24YJR117W 1362 nt0.74□□□□□ -2.29
UFD4P33202 ATP16YDL004W 483 nt0.73□□□□□ -2.29
UFD4P33202 YEL075CYEL075C 369 nt0.73□□□□□ -2.29
UFD4P33202 YCR007CYCR007C 720 nt0.73□□□□□ -2.29
UFD4P33202 CTK3YML112W 891 nt0.73□□□□□ -2.29
UFD4P33202 YBL028CYBL028C 321 nt0.73□□□□□ -2.29
UFD4P33202 RGM1YMR182C 636 nt0.73□□□□□ -2.29
UFD4P33202 YLR053CYLR053C 327 nt0.72□□□□□ -2.29
UFD4P33202 YLR307C-AYLR307C-A 264 nt0.72□□□□□ -2.29
UFD4P33202 SEC63YOR254C 1992 nt0.71□□□□□ -2.3
UFD4P33202 DAL5YJR152W 1632 nt0.71□□□□□ -2.3
UFD4P33202 YOR152CYOR152C 771 nt0.71□□□□□ -2.3
UFD4P33202 EST2YLR318W 2655 nt0.7□□□□□ -2.3
UFD4P33202 BNA7YDR428C 786 nt0.7□□□□□ -2.3
UFD4P33202 RGI2YIL057C 495 nt0.7□□□□□ -2.3
UFD4P33202 PRP39YML046W 1890 nt0.7□□□□□ -2.3
UFD4P33202 CTR9YOL145C 3234 nt0.7□□□□□ -2.3
UFD4P33202 HIR3YJR140C 4947 nt0.69□□□□□ -2.3
UFD4P33202 SNX4YJL036W 1272 nt0.69□□□□□ -2.3
UFD4P33202 WAR1YML076C 2835 nt0.69□□□□□ -2.3
UFD4P33202 DXO1YDR370C 1329 nt0.69□□□□□ -2.3
UFD4P33202 SHU2YDR078C 672 nt0.68□□□□□ -2.3
UFD4P33202 CIC1YHR052W 1131 nt0.68□□□□□ -2.3
UFD4P33202 YHR214W-AYHR214W-A 486 nt0.68□□□□□ -2.3
UFD4P33202 YAR068WYAR068W 486 nt0.68□□□□□ -2.3
UFD4P33202 YMR031W-AYMR031W-A 327 nt0.68□□□□□ -2.3
UFD4P33202 ATG5YPL149W 885 nt0.68□□□□□ -2.3
UFD4P33202 YDR132CYDR132C 1488 nt0.68□□□□□ -2.3
UFD4P33202 HUL5YGL141W 2733 nt0.68□□□□□ -2.3
UFD4P33202 YBR277CYBR277C 402 nt0.67□□□□□ -2.3
UFD4P33202 PUS9YDL036C 1389 nt0.67□□□□□ -2.3
UFD4P33202 YGR273CYGR273C 525 nt0.67□□□□□ -2.3
UFD4P33202 YAR075WYAR075W 474 nt0.67□□□□□ -2.3
UFD4P33202 BAG7YOR134W 1230 nt0.67□□□□□ -2.3
UFD4P33202 HMI1YOL095C 2121 nt0.66□□□□□ -2.3
UFD4P33202 CDC50YCR094W 1176 nt0.66□□□□□ -2.3
UFD4P33202 COS7YDL248W 1152 nt0.66□□□□□ -2.3
UFD4P33202 YMR144WYMR144W 1029 nt0.66□□□□□ -2.3
UFD4P33202 YBR032WYBR032W 303 nt0.65□□□□□ -2.31
UFD4P33202 FUS1YCL027W 1539 nt0.64□□□□□ -2.31
UFD4P33202 HLR1YDR528W 1272 nt0.64□□□□□ -2.31
UFD4P33202 RSM26YJR101W 801 nt0.64□□□□□ -2.31
UFD4P33202 TEN1YLR010C 483 nt0.64□□□□□ -2.31
UFD4P33202 YLR169WYLR169W 354 nt0.64□□□□□ -2.31
UFD4P33202 DYN3YMR299C 939 nt0.64□□□□□ -2.31
UFD4P33202 YML002WYML002W 2214 nt0.63□□□□□ -2.31
UFD4P33202 BTT1YDR252W 450 nt0.63□□□□□ -2.31
UFD4P33202 SVP26YHR181W 687 nt0.63□□□□□ -2.31
UFD4P33202 CUP9YPL177C 921 nt0.63□□□□□ -2.31
UFD4P33202 RXT2YBR095C 1293 nt0.63□□□□□ -2.31
UFD4P33202 BIT61YJL058C 1632 nt0.63□□□□□ -2.31
UFD4P33202 MNE1YOR350C 1992 nt0.62□□□□□ -2.31
UFD4P33202 PAF1YBR279W 1338 nt0.62□□□□□ -2.31
UFD4P33202 YIR036W-AYIR036W-A 402 nt0.61□□□□□ -2.31
UFD4P33202 TOA1YOR194C 861 nt0.61□□□□□ -2.31
UFD4P33202 YLR149CYLR149C 2193 nt0.61□□□□□ -2.31
UFD4P33202 SLK19YOR195W 2466 nt0.61□□□□□ -2.31
UFD4P33202 CUR1YPR158W 759 nt0.61□□□□□ -2.31
UFD4P33202 YNL034WYNL034W 1839 nt0.6□□□□□ -2.31
UFD4P33202 HSE1YHL002W 1359 nt0.6□□□□□ -2.31
UFD4P33202 BEM3YPL115C 3387 nt0.6□□□□□ -2.31
UFD4P33202 SRN2YLR119W 642 nt0.6□□□□□ -2.31
UFD4P33202 YLL054CYLL054C 2532 nt0.59□□□□□ -2.31
UFD4P33202 MTC7YEL033W 420 nt0.59□□□□□ -2.32
UFD4P33202 RPL40AYIL148W 387 nt0.59□□□□□ -2.32
UFD4P33202 PEX27YOR193W 1131 nt0.59□□□□□ -2.32
UFD4P33202 MUK1YPL070W 1839 nt0.59□□□□□ -2.32
UFD4P33202 COX1Q0045 1605 nt0.58□□□□□ -2.32
UFD4P33202 RLM1YPL089C 2031 nt0.58□□□□□ -2.32
UFD4P33202 YHR145CYHR145C 357 nt0.58□□□□□ -2.32
UFD4P33202 CAF20YOR276W 486 nt0.58□□□□□ -2.32
UFD4P33202 HSH49YOR319W 642 nt0.58□□□□□ -2.32
UFD4P33202 AEP3YPL005W 1821 nt0.57□□□□□ -2.32
UFD4P33202 FMN1YDR236C 657 nt0.57□□□□□ -2.32
UFD4P33202 TIM21YGR033C 720 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 50.8 ms