Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YGL188C-AYGL188C-A 141 nt3.7□□□□□ -1.82
MSH3P25336 RPL22AYLR061W 366 nt3.7□□□□□ -1.82
MSH3P25336 RAD5YLR032W 3510 nt3.7□□□□□ -1.82
MSH3P25336 STU1YBL034C 4542 nt3.69□□□□□ -1.82
MSH3P25336 IRC10YOL015W 1761 nt3.69□□□□□ -1.82
MSH3P25336 HPA3YEL066W 540 nt3.69□□□□□ -1.82
MSH3P25336 YER079C-AYER079C-A 339 nt3.69□□□□□ -1.82
MSH3P25336 PSY1YKL076C 384 nt3.69□□□□□ -1.82
MSH3P25336 YBL065WYBL065W 345 nt3.69□□□□□ -1.82
MSH3P25336 STU2YLR045C 2667 nt3.69□□□□□ -1.82
MSH3P25336 VTC4YJL012C 2166 nt3.69□□□□□ -1.82
MSH3P25336 RAD2YGR258C 3096 nt3.69□□□□□ -1.82
MSH3P25336 ARO1YDR127W 4767 nt3.68□□□□□ -1.82
MSH3P25336 GPI13YLL031C 3054 nt3.68□□□□□ -1.82
MSH3P25336 YDR406W-AYDR406W-A 246 nt3.68□□□□□ -1.82
MSH3P25336 RPS21AYKR057W 264 nt3.68□□□□□ -1.82
MSH3P25336 GCN1YGL195W 8019 nt3.68□□□□□ -1.82
MSH3P25336 RKM1YPL208W 1752 nt3.68□□□□□ -1.82
MSH3P25336 YHR078WYHR078W 1659 nt3.68□□□□□ -1.82
MSH3P25336 SET1YHR119W 3243 nt3.67□□□□□ -1.82
MSH3P25336 YGL149WYGL149W 306 nt3.67□□□□□ -1.82
MSH3P25336 LSM1YJL124C 519 nt3.67□□□□□ -1.82
MSH3P25336 SEC15YGL233W 2733 nt3.67□□□□□ -1.82
MSH3P25336 LRG1YDL240W 3054 nt3.67□□□□□ -1.82
MSH3P25336 BIT61YJL058C 1632 nt3.66□□□□□ -1.82
MSH3P25336 snR80snR80 171 nt3.66□□□□□ -1.82
MSH3P25336 ADK1YDR226W 669 nt3.66□□□□□ -1.82
MSH3P25336 WIP1YDR374W-A 270 nt3.66□□□□□ -1.82
MSH3P25336 Q0092Q0092 141 nt3.66□□□□□ -1.82
MSH3P25336 YER023C-AYER023C-A 213 nt3.66□□□□□ -1.82
MSH3P25336 RPL26AYLR344W 384 nt3.66□□□□□ -1.82
MSH3P25336 PEX11YOL147C 711 nt3.66□□□□□ -1.82
MSH3P25336 MNT3YIL014W 1893 nt3.66□□□□□ -1.82
MSH3P25336 CSR2YPR030W 3366 nt3.66□□□□□ -1.82
MSH3P25336 TAO3YIL129C 7131 nt3.66□□□□□ -1.82
MSH3P25336 TPS2YDR074W 2691 nt3.66□□□□□ -1.82
MSH3P25336 BNI4YNL233W 2679 nt3.65□□□□□ -1.82
MSH3P25336 YDL011CYDL011C 324 nt3.65□□□□□ -1.83
MSH3P25336 CDH1YGL003C 1701 nt3.64□□□□□ -1.83
MSH3P25336 TFB1YDR311W 1929 nt3.64□□□□□ -1.83
MSH3P25336 SIZ1YDR409W 2715 nt3.64□□□□□ -1.83
MSH3P25336 YHL006W-AYHL006W-A 354 nt3.64□□□□□ -1.83
MSH3P25336 TAR1YLR154W-C 375 nt3.64□□□□□ -1.83
MSH3P25336 GOT1YMR292W 417 nt3.64□□□□□ -1.83
MSH3P25336 snR191snR191 274 nt3.64□□□□□ -1.83
MSH3P25336 YJL016WYJL016W 1686 nt3.64□□□□□ -1.83
MSH3P25336 NAN1YPL126W 2691 nt3.64□□□□□ -1.83
MSH3P25336 IOC3YFR013W 2364 nt3.63□□□□□ -1.83
MSH3P25336 VPS41YDR080W 2979 nt3.63□□□□□ -1.83
MSH3P25336 AST2YER101C 1293 nt3.63□□□□□ -1.83
MSH3P25336 TMA22YJR014W 597 nt3.63□□□□□ -1.83
MSH3P25336 TMA10YLR327C 261 nt3.63□□□□□ -1.83
MSH3P25336 COX7YMR256C 183 nt3.63□□□□□ -1.83
MSH3P25336 RRM3YHR031C 2172 nt3.63□□□□□ -1.83
MSH3P25336 REC8YPR007C 2043 nt3.63□□□□□ -1.83
MSH3P25336 REG1YDR028C 3045 nt3.62□□□□□ -1.83
MSH3P25336 MSR1YHR091C 1932 nt3.62□□□□□ -1.83
MSH3P25336 PRK1YIL095W 2433 nt3.62□□□□□ -1.83
MSH3P25336 CIN8YEL061C 3003 nt3.62□□□□□ -1.83
MSH3P25336 DAD4YDR320C-A 219 nt3.62□□□□□ -1.83
MSH3P25336 YIL058WYIL058W 285 nt3.62□□□□□ -1.83
MSH3P25336 YLR458WYLR458W 381 nt3.62□□□□□ -1.83
MSH3P25336 YNL198CYNL198C 303 nt3.62□□□□□ -1.83
MSH3P25336 TCP1YDR212W 1680 nt3.62□□□□□ -1.83
MSH3P25336 VBA4YDR119W 2307 nt3.61□□□□□ -1.83
MSH3P25336 SHQ1YIL104C 1524 nt3.61□□□□□ -1.83
MSH3P25336 SIP3YNL257C 3690 nt3.61□□□□□ -1.83
MSH3P25336 CDC36YDL165W 576 nt3.61□□□□□ -1.83
MSH3P25336 YDR344CYDR344C 444 nt3.61□□□□□ -1.83
MSH3P25336 YJL197C-AYJL197C-A 282 nt3.61□□□□□ -1.83
MSH3P25336 SMA2YML066C 1110 nt3.61□□□□□ -1.83
MSH3P25336 YPR014CYPR014C 330 nt3.61□□□□□ -1.83
MSH3P25336 MSS11YMR164C 2277 nt3.61□□□□□ -1.83
MSH3P25336 OSW7YFR039C 1533 nt3.6□□□□□ -1.83
MSH3P25336 DYN2YDR424C 279 nt3.6□□□□□ -1.83
MSH3P25336 COX23YHR116W 456 nt3.6□□□□□ -1.83
MSH3P25336 NCE101YJL205C 162 nt3.6□□□□□ -1.83
MSH3P25336 ESF2YNR054C 951 nt3.6□□□□□ -1.83
MSH3P25336 TIM12YBR091C 330 nt3.6□□□□□ -1.83
MSH3P25336 YNL034WYNL034W 1839 nt3.6□□□□□ -1.83
MSH3P25336 MSH2YOL090W 2895 nt3.6□□□□□ -1.83
MSH3P25336 FAS1YKL182W 6156 nt3.59□□□□□ -1.83
MSH3P25336 LEU3YLR451W 2661 nt3.59□□□□□ -1.83
MSH3P25336 NPR1YNL183C 2373 nt3.59□□□□□ -1.83
MSH3P25336 MZM1YDR493W 372 nt3.59□□□□□ -1.83
MSH3P25336 RPL8BYLL045C 771 nt3.59□□□□□ -1.83
MSH3P25336 VPS52YDR484W 1926 nt3.59□□□□□ -1.83
MSH3P25336 REV1YOR346W 2958 nt3.59□□□□□ -1.84
MSH3P25336 YPK1YKL126W 2043 nt3.58□□□□□ -1.84
MSH3P25336 YDL211CYDL211C 1119 nt3.58□□□□□ -1.84
MSH3P25336 RPL14BYHL001W 417 nt3.58□□□□□ -1.84
MSH3P25336 YOR050CYOR050C 348 nt3.58□□□□□ -1.84
MSH3P25336 ECM5YMR176W 4236 nt3.58□□□□□ -1.84
MSH3P25336 POL2YNL262W 6669 nt3.57□□□□□ -1.84
MSH3P25336 APC11YDL008W 498 nt3.57□□□□□ -1.84
MSH3P25336 YDL041WYDL041W 354 nt3.57□□□□□ -1.84
MSH3P25336 RPL35AYDL191W 363 nt3.57□□□□□ -1.84
MSH3P25336 TLC1TLC1 1301 nt3.57□□□□□ -1.84
MSH3P25336 YGR069WYGR069W 336 nt3.57□□□□□ -1.84
MSH3P25336 YGR174W-AYGR174W-A 87 nt3.57□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms