Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHMP24386 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHMP24386 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 AC090192.1-201ENST00000517740 490 ntBASIC19.09■□□□□ 0.65
CHMP24386 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP24386 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP24386 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.09■□□□□ 0.65
CHMP24386 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP24386 BID-214ENST00000617586 542 ntTSL 5 BASIC19.09■□□□□ 0.65
CHMP24386 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.09■□□□□ 0.65
CHMP24386 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CHMP24386 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHMP24386 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP24386 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP24386 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CHMP24386 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP24386 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.08■□□□□ 0.65
CHMP24386 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHMP24386 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP24386 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
CHMP24386 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP24386 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.08■□□□□ 0.64
CHMP24386 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 AC008175.2-201ENST00000612840 297 ntBASIC19.08■□□□□ 0.64
CHMP24386 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.08■□□□□ 0.64
CHMP24386 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP24386 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHMP24386 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP24386 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.08■□□□□ 0.64
CHMP24386 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHMP24386 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.07■□□□□ 0.64
CHMP24386 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CHMP24386 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP24386 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.07■□□□□ 0.64
CHMP24386 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.07■□□□□ 0.64
CHMP24386 POU5F1P4-201ENST00000413175 1085 ntBASIC19.07■□□□□ 0.64
CHMP24386 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.07■□□□□ 0.64
CHMP24386 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.07■□□□□ 0.64
CHMP24386 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP24386 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHMP24386 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP24386 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.07■□□□□ 0.64
CHMP24386 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.07■□□□□ 0.64
CHMP24386 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 AC027702.1-201ENST00000563810 1770 ntBASIC19.06■□□□□ 0.64
CHMP24386 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHMP24386 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHMP24386 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHMP24386 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP24386 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.06■□□□□ 0.64
CHMP24386 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHMP24386 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.06■□□□□ 0.64
CHMP24386 SLC7A5P1-201ENST00000568957 537 ntBASIC19.06■□□□□ 0.64
CHMP24386 UBE2DNL-204ENST00000602536 740 ntBASIC19.06■□□□□ 0.64
CHMP24386 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CHMP24386 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP24386 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
CHMP24386 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CHMP24386 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP24386 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.05■□□□□ 0.64
CHMP24386 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP24386 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.05■□□□□ 0.64
CHMP24386 AC080038.1-201ENST00000611274 1154 ntBASIC19.05■□□□□ 0.64
CHMP24386 AC120498.10-201ENST00000621827 505 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms