Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCND1P24385 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCND1P24385 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.51■□□□□ 0.87
CCND1P24385 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCND1P24385 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.51■□□□□ 0.87
CCND1P24385 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 AC098818.2-201ENST00000564925 2320 ntBASIC20.5■□□□□ 0.87
CCND1P24385 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.5■□□□□ 0.87
CCND1P24385 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.5■□□□□ 0.87
CCND1P24385 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.5■□□□□ 0.87
CCND1P24385 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCND1P24385 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.5■□□□□ 0.87
CCND1P24385 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.5■□□□□ 0.87
CCND1P24385 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.5■□□□□ 0.87
CCND1P24385 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.5■□□□□ 0.87
CCND1P24385 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.5■□□□□ 0.87
CCND1P24385 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.5■□□□□ 0.87
CCND1P24385 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCND1P24385 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCND1P24385 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CCND1P24385 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCND1P24385 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.49■□□□□ 0.87
CCND1P24385 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCND1P24385 TERF1P2-201ENST00000583350 1212 ntBASIC20.49■□□□□ 0.87
CCND1P24385 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.49■□□□□ 0.87
CCND1P24385 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.49■□□□□ 0.87
CCND1P24385 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.49■□□□□ 0.87
CCND1P24385 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCND1P24385 KRT87P-202ENST00000534226 1464 ntBASIC20.49■□□□□ 0.87
CCND1P24385 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.48■□□□□ 0.87
CCND1P24385 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.48■□□□□ 0.87
CCND1P24385 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.48■□□□□ 0.87
CCND1P24385 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.48■□□□□ 0.87
CCND1P24385 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.48■□□□□ 0.87
CCND1P24385 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.48■□□□□ 0.87
CCND1P24385 AC053503.5-201ENST00000601508 636 ntBASIC20.48■□□□□ 0.87
CCND1P24385 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.48■□□□□ 0.87
CCND1P24385 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCND1P24385 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCND1P24385 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCND1P24385 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.47■□□□□ 0.87
CCND1P24385 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCND1P24385 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.47■□□□□ 0.87
CCND1P24385 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.47■□□□□ 0.87
CCND1P24385 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCND1P24385 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCND1P24385 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.46■□□□□ 0.87
CCND1P24385 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.46■□□□□ 0.87
CCND1P24385 AC026471.1-201ENST00000564629 3026 ntBASIC20.46■□□□□ 0.87
CCND1P24385 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CCND1P24385 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCND1P24385 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
CCND1P24385 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCND1P24385 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCND1P24385 EEF1DP3-203ENST00000566025 782 ntBASIC20.46■□□□□ 0.87
CCND1P24385 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms