Protein–RNA interactions for Protein: P23394

PRP28, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, yeastyeast

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP28P23394 tW(UCA)QtW(UCA)Q 74 nt2.99□□□□□ -1.93
PRP28P23394 BIL1YOR304C-A 231 nt2.99□□□□□ -1.93
PRP28P23394 YPR010C-AYPR010C-A 219 nt2.99□□□□□ -1.93
PRP28P23394 NDD1YOR372C 1665 nt2.98□□□□□ -1.93
PRP28P23394 YNL034WYNL034W 1839 nt2.98□□□□□ -1.93
PRP28P23394 AKR1YDR264C 2295 nt2.98□□□□□ -1.93
PRP28P23394 ATG26YLR189C 3597 nt2.98□□□□□ -1.93
PRP28P23394 SLH1YGR271W 5904 nt2.98□□□□□ -1.93
PRP28P23394 YJL202CYJL202C 348 nt2.98□□□□□ -1.93
PRP28P23394 PRE8YML092C 753 nt2.98□□□□□ -1.93
PRP28P23394 COX7YMR256C 183 nt2.98□□□□□ -1.93
PRP28P23394 ATP15YPL271W 189 nt2.98□□□□□ -1.93
PRP28P23394 RIF1YBR275C 5751 nt2.98□□□□□ -1.93
PRP28P23394 CIN8YEL061C 3003 nt2.98□□□□□ -1.93
PRP28P23394 YHL006W-AYHL006W-A 354 nt2.97□□□□□ -1.93
PRP28P23394 PAU14YIL176C 363 nt2.97□□□□□ -1.93
PRP28P23394 MSL1YIR009W 336 nt2.97□□□□□ -1.93
PRP28P23394 PAU1YJL223C 363 nt2.97□□□□□ -1.93
PRP28P23394 GOT1YMR292W 417 nt2.97□□□□□ -1.93
PRP28P23394 RGR1YLR071C 3249 nt2.97□□□□□ -1.93
PRP28P23394 SIP3YNL257C 3690 nt2.97□□□□□ -1.93
PRP28P23394 COX1Q0045 1605 nt2.97□□□□□ -1.93
PRP28P23394 STE23YLR389C 3084 nt2.96□□□□□ -1.93
PRP28P23394 YHR078WYHR078W 1659 nt2.96□□□□□ -1.94
PRP28P23394 YAR029WYAR029W 225 nt2.96□□□□□ -1.94
PRP28P23394 IMP4YNL075W 873 nt2.96□□□□□ -1.94
PRP28P23394 STE6YKL209C 3873 nt2.96□□□□□ -1.94
PRP28P23394 SSY1YDR160W 2559 nt2.96□□□□□ -1.94
PRP28P23394 NPR1YNL183C 2373 nt2.95□□□□□ -1.94
PRP28P23394 APC11YDL008W 498 nt2.95□□□□□ -1.94
PRP28P23394 YMR122W-AYMR122W-A 255 nt2.95□□□□□ -1.94
PRP28P23394 snR36snR36 182 nt2.95□□□□□ -1.94
PRP28P23394 YDR210W-BYDR210W-B 5313 nt2.95□□□□□ -1.94
PRP28P23394 YDR261W-BYDR261W-B 5313 nt2.95□□□□□ -1.94
PRP28P23394 YFL002W-AYFL002W-A 5313 nt2.95□□□□□ -1.94
PRP28P23394 YGR161W-BYGR161W-B 5313 nt2.95□□□□□ -1.94
PRP28P23394 YLR410W-BYLR410W-B 5313 nt2.95□□□□□ -1.94
PRP28P23394 YCL019WYCL019W 5313 nt2.95□□□□□ -1.94
PRP28P23394 RPA190YOR341W 4995 nt2.94□□□□□ -1.94
PRP28P23394 FLO5YHR211W 3228 nt2.94□□□□□ -1.94
PRP28P23394 TPS2YDR074W 2691 nt2.94□□□□□ -1.94
PRP28P23394 snR8snR8 190 nt2.94□□□□□ -1.94
PRP28P23394 YDR133CYDR133C 336 nt2.94□□□□□ -1.94
PRP28P23394 YDR250CYDR250C 276 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)DtK(UUU)D 73 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)G1tK(UUU)G1 73 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)G2tK(UUU)G2 73 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)KtK(UUU)K 73 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)LtK(UUU)L 73 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)OtK(UUU)O 73 nt2.94□□□□□ -1.94
PRP28P23394 tK(UUU)PtK(UUU)P 73 nt2.94□□□□□ -1.94
PRP28P23394 NCE101YJL205C 162 nt2.94□□□□□ -1.94
PRP28P23394 MET6YER091C 2304 nt2.94□□□□□ -1.94
PRP28P23394 DRS2YAL026C 4068 nt2.94□□□□□ -1.94
PRP28P23394 ECM5YMR176W 4236 nt2.94□□□□□ -1.94
PRP28P23394 SHQ1YIL104C 1524 nt2.93□□□□□ -1.94
PRP28P23394 GYP7YDL234C 2241 nt2.93□□□□□ -1.94
PRP28P23394 HMRA2YCR096C 360 nt2.93□□□□□ -1.94
PRP28P23394 CAJ1YER048C 1176 nt2.93□□□□□ -1.94
PRP28P23394 SUP56tL(CAA)A 82 nt2.93□□□□□ -1.94
PRP28P23394 AAD16YFL057C 459 nt2.93□□□□□ -1.94
PRP28P23394 SUP53tL(CAA)C 82 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)DtL(CAA)D 82 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)G1tL(CAA)G1 82 nt2.93□□□□□ -1.94
PRP28P23394 SUP54tL(CAA)G2 82 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)G3tL(CAA)G3 82 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)KtL(CAA)K 82 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)LtL(CAA)L 82 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)MtL(CAA)M 82 nt2.93□□□□□ -1.94
PRP28P23394 YFR056CYFR056C 369 nt2.93□□□□□ -1.94
PRP28P23394 tL(CAA)NtL(CAA)N 82 nt2.93□□□□□ -1.94
PRP28P23394 YIL058WYIL058W 285 nt2.93□□□□□ -1.94
PRP28P23394 AIM32YML050W 936 nt2.93□□□□□ -1.94
PRP28P23394 PGA1YNL158W 597 nt2.93□□□□□ -1.94
PRP28P23394 RPL20BYOR312C 519 nt2.93□□□□□ -1.94
PRP28P23394 OST1YJL002C 1431 nt2.93□□□□□ -1.94
PRP28P23394 COG3YER157W 2406 nt2.92□□□□□ -1.94
PRP28P23394 YEL057CYEL057C 702 nt2.92□□□□□ -1.94
PRP28P23394 YER023C-AYER023C-A 213 nt2.92□□□□□ -1.94
PRP28P23394 HMF1YER057C 390 nt2.92□□□□□ -1.94
PRP28P23394 ESF2YNR054C 951 nt2.92□□□□□ -1.94
PRP28P23394 MOT1YPL082C 5604 nt2.91□□□□□ -1.94
PRP28P23394 AI2Q0055 2565 nt2.91□□□□□ -1.94
PRP28P23394 RPS17BYDR447C 411 nt2.91□□□□□ -1.94
PRP28P23394 YMR31YFR049W 372 nt2.91□□□□□ -1.94
PRP28P23394 NUP82YJL061W 2142 nt2.91□□□□□ -1.94
PRP28P23394 YJL222W-BYJL222W-B 138 nt2.91□□□□□ -1.94
PRP28P23394 AIM26YKL037W 357 nt2.91□□□□□ -1.94
PRP28P23394 PHD1YKL043W 1101 nt2.91□□□□□ -1.94
PRP28P23394 SHE2YKL130C 741 nt2.91□□□□□ -1.94
PRP28P23394 VPS52YDR484W 1926 nt2.91□□□□□ -1.94
PRP28P23394 BOI1YBL085W 2943 nt2.91□□□□□ -1.94
PRP28P23394 STE5YDR103W 2754 nt2.9□□□□□ -1.94
PRP28P23394 YPK1YKL126W 2043 nt2.9□□□□□ -1.94
PRP28P23394 YJL016WYJL016W 1686 nt2.9□□□□□ -1.95
PRP28P23394 IRC23YOR044W 474 nt2.9□□□□□ -1.95
PRP28P23394 LEU3YLR451W 2661 nt2.9□□□□□ -1.95
PRP28P23394 CHS2YBR038W 2892 nt2.89□□□□□ -1.95
PRP28P23394 FMP32YFL046W 624 nt2.89□□□□□ -1.95
PRP28P23394 HYR1YIR037W 492 nt2.89□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 42.6 ms