Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MMP8P22894 AC092437.1-201ENST00000624794 1048 ntBASIC21.57■■□□□ 1.04
MMP8P22894 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MMP8P22894 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.57■■□□□ 1.04
MMP8P22894 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.57■■□□□ 1.04
MMP8P22894 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.57■■□□□ 1.04
MMP8P22894 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP8P22894 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.56■■□□□ 1.04
MMP8P22894 AC068338.2-201ENST00000563278 1430 ntBASIC21.56■■□□□ 1.04
MMP8P22894 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
MMP8P22894 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP8P22894 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP8P22894 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP8P22894 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP8P22894 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP8P22894 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP8P22894 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MMP8P22894 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 AC092720.2-201ENST00000602388 1665 ntBASIC21.56■■□□□ 1.04
MMP8P22894 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP8P22894 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP8P22894 KRT8P36-201ENST00000489121 1440 ntBASIC21.55■■□□□ 1.04
MMP8P22894 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
MMP8P22894 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.55■■□□□ 1.04
MMP8P22894 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.55■■□□□ 1.04
MMP8P22894 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.55■■□□□ 1.04
MMP8P22894 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.55■■□□□ 1.04
MMP8P22894 AL162377.1-201ENST00000618844 1793 ntBASIC21.55■■□□□ 1.04
MMP8P22894 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP8P22894 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
MMP8P22894 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
MMP8P22894 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP8P22894 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP8P22894 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MMP8P22894 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
MMP8P22894 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
MMP8P22894 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
MMP8P22894 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.54■■□□□ 1.04
MMP8P22894 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MMP8P22894 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
MMP8P22894 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP8P22894 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP8P22894 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.54■■□□□ 1.04
MMP8P22894 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP8P22894 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 CYP21A1P-202ENST00000354927 1481 ntBASIC21.53■■□□□ 1.04
MMP8P22894 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
MMP8P22894 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP8P22894 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP8P22894 RARRES2P4-201ENST00000514074 484 ntBASIC21.53■■□□□ 1.04
MMP8P22894 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
MMP8P22894 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 AL512408.1-201ENST00000569378 2000 ntBASIC21.53■■□□□ 1.04
MMP8P22894 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP8P22894 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP8P22894 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP8P22894 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP8P22894 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP8P22894 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP8P22894 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms