Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCL1P22362 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCL1P22362 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCL1P22362 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL1P22362 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL1P22362 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CCL1P22362 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCL1P22362 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.63■□□□□ 0.41
CCL1P22362 KRT19P1-201ENST00000405746 1186 ntBASIC17.63■□□□□ 0.41
CCL1P22362 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCL1P22362 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL1P22362 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL1P22362 TCF3P1-201ENST00000423021 1937 ntBASIC17.62■□□□□ 0.41
CCL1P22362 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
CCL1P22362 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
CCL1P22362 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.62■□□□□ 0.41
CCL1P22362 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.62■□□□□ 0.41
CCL1P22362 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCL1P22362 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCL1P22362 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.62■□□□□ 0.41
CCL1P22362 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.62■□□□□ 0.41
CCL1P22362 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.62■□□□□ 0.41
CCL1P22362 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.62■□□□□ 0.41
CCL1P22362 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL1P22362 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCL1P22362 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.62■□□□□ 0.41
CCL1P22362 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCL1P22362 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL1P22362 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCL1P22362 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL1P22362 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL1P22362 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.61■□□□□ 0.41
CCL1P22362 KRT18P61-201ENST00000585825 1298 ntBASIC17.61■□□□□ 0.41
CCL1P22362 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL1P22362 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCL1P22362 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL1P22362 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL1P22362 AC112907.3-201ENST00000577781 2400 ntBASIC17.6■□□□□ 0.41
CCL1P22362 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL1P22362 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCL1P22362 ZNRF2P3-201ENST00000424200 374 ntBASIC17.6■□□□□ 0.41
CCL1P22362 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.6■□□□□ 0.41
CCL1P22362 FAM21FP-204ENST00000608637 956 ntBASIC17.6■□□□□ 0.41
CCL1P22362 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.6■□□□□ 0.41
CCL1P22362 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCL1P22362 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL1P22362 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL1P22362 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL1P22362 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL1P22362 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL1P22362 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL1P22362 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.59■□□□□ 0.41
CCL1P22362 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL1P22362 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms