Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 FAM21FP-204ENST00000608637 956 ntBASIC18.79■□□□□ 0.6
RPS4Y1P22090 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.79■□□□□ 0.6
RPS4Y1P22090 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPS4Y1P22090 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 AC137761.2-201ENST00000561729 223 ntBASIC18.78■□□□□ 0.6
RPS4Y1P22090 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 AC145350.3-201ENST00000569033 163 ntBASIC18.78■□□□□ 0.6
RPS4Y1P22090 MFSD11-216ENST00000590393 1141 ntBASIC18.78■□□□□ 0.6
RPS4Y1P22090 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RPS4Y1P22090 AL591742.1-201ENST00000604433 565 ntBASIC18.78■□□□□ 0.6
RPS4Y1P22090 SLC25A24-204ENST00000569674 2357 ntBASIC18.78■□□□□ 0.6
RPS4Y1P22090 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4Y1P22090 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 AC013268.1-206ENST00000638368 961 ntBASIC18.77■□□□□ 0.6
RPS4Y1P22090 AC112229.1-201ENST00000639295 961 ntBASIC18.77■□□□□ 0.6
RPS4Y1P22090 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4Y1P22090 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.77■□□□□ 0.6
RPS4Y1P22090 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RPS4Y1P22090 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.77■□□□□ 0.59
RPS4Y1P22090 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS4Y1P22090 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.76■□□□□ 0.59
RPS4Y1P22090 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4Y1P22090 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.76■□□□□ 0.59
RPS4Y1P22090 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.76■□□□□ 0.59
RPS4Y1P22090 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
RPS4Y1P22090 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4Y1P22090 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y1P22090 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y1P22090 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 AC006015.1-201ENST00000429970 570 ntBASIC18.75■□□□□ 0.59
RPS4Y1P22090 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y1P22090 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y1P22090 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4Y1P22090 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y1P22090 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4Y1P22090 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 AC099778.1-201ENST00000568593 1911 ntBASIC18.74■□□□□ 0.59
RPS4Y1P22090 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4Y1P22090 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4Y1P22090 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms