Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC008175.2-201ENST00000612840 297 ntBASIC19■□□□□ 0.63
TNFRSF1BP20333 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF1BP20333 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19■□□□□ 0.63
TNFRSF1BP20333 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1BP20333 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF1BP20333 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 AC092720.2-201ENST00000602388 1665 ntBASIC18.99■□□□□ 0.63
TNFRSF1BP20333 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 KRT87P-202ENST00000534226 1464 ntBASIC18.99■□□□□ 0.63
TNFRSF1BP20333 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TNFRSF1BP20333 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.98■□□□□ 0.63
TNFRSF1BP20333 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 POU5F1P4-201ENST00000413175 1085 ntBASIC18.97■□□□□ 0.63
TNFRSF1BP20333 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TNFRSF1BP20333 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF1BP20333 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 SMG8-203ENST00000578922 2178 ntBASIC18.95■□□□□ 0.62
TNFRSF1BP20333 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 AL358852.1-201ENST00000623174 1268 ntBASIC18.95■□□□□ 0.62
TNFRSF1BP20333 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF1BP20333 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms