Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 AC068338.2-201ENST00000563278 1430 ntBASIC20.65■□□□□ 0.9
HLA-DPA1P20036 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 MIR2861-201ENST00000636310 90 ntBASIC20.65■□□□□ 0.9
HLA-DPA1P20036 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HLA-DPA1P20036 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DPA1P20036 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
HLA-DPA1P20036 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HLA-DPA1P20036 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 AC007322.1-201ENST00000426983 750 ntBASIC20.64■□□□□ 0.89
HLA-DPA1P20036 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 AC016405.3-201ENST00000607710 860 ntBASIC20.64■□□□□ 0.89
HLA-DPA1P20036 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HLA-DPA1P20036 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 FEM1AP1-201ENST00000431297 1995 ntBASIC20.63■□□□□ 0.89
HLA-DPA1P20036 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.63■□□□□ 0.89
HLA-DPA1P20036 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 AC004911.1-201ENST00000416316 871 ntBASIC20.62■□□□□ 0.89
HLA-DPA1P20036 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 RARRES2P4-201ENST00000514074 484 ntBASIC20.62■□□□□ 0.89
HLA-DPA1P20036 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 AC080038.1-201ENST00000611274 1154 ntBASIC20.62■□□□□ 0.89
HLA-DPA1P20036 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HLA-DPA1P20036 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HLA-DPA1P20036 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms