Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP4P12644 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 LETM1P2-201ENST00000597330 2178 ntBASIC18.69■□□□□ 0.58
BMP4P12644 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 AC010141.3-201ENST00000456659 717 ntBASIC18.69■□□□□ 0.58
BMP4P12644 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
BMP4P12644 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
BMP4P12644 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
BMP4P12644 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP4P12644 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BMP4P12644 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.68■□□□□ 0.58
BMP4P12644 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
BMP4P12644 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BMP4P12644 KRT18P14-201ENST00000534205 1250 ntBASIC18.68■□□□□ 0.58
BMP4P12644 CCDC92B-201ENST00000575506 885 ntBASIC18.68■□□□□ 0.58
BMP4P12644 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.68■□□□□ 0.58
BMP4P12644 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.68■□□□□ 0.58
BMP4P12644 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.68■□□□□ 0.58
BMP4P12644 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.68■□□□□ 0.58
BMP4P12644 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.68■□□□□ 0.58
BMP4P12644 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP4P12644 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.67■□□□□ 0.58
BMP4P12644 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 AC006128.1-201ENST00000624704 1661 ntBASIC18.67■□□□□ 0.58
BMP4P12644 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BMP4P12644 KRT18P5-201ENST00000436075 1291 ntBASIC18.67■□□□□ 0.58
BMP4P12644 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L2-201ENST00000561772 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BMP4P12644 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
BMP4P12644 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L6-201ENST00000626483 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L1-201ENST00000627662 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L8-201ENST00000629013 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L3-201ENST00000630187 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L7-201ENST00000630678 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 DUX4L5-201ENST00000630834 1275 ntBASIC18.67■□□□□ 0.58
BMP4P12644 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BMP4P12644 AC116562.4-201ENST00000641316 2276 ntBASIC18.67■□□□□ 0.58
BMP4P12644 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP4P12644 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
BMP4P12644 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP4P12644 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BMP4P12644 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP4P12644 AC027702.1-201ENST00000563810 1770 ntBASIC18.66■□□□□ 0.58
BMP4P12644 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.66■□□□□ 0.58
BMP4P12644 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.66■□□□□ 0.58
BMP4P12644 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.66■□□□□ 0.58
BMP4P12644 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.66■□□□□ 0.58
BMP4P12644 TERF1P2-201ENST00000583350 1212 ntBASIC18.66■□□□□ 0.58
BMP4P12644 AC022517.1-201ENST00000592429 346 ntBASIC18.66■□□□□ 0.58
BMP4P12644 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BMP4P12644 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms