Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RARAP10276 AL162377.1-201ENST00000618844 1793 ntBASIC21.48■■□□□ 1.03
RARAP10276 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RARAP10276 AL512408.1-201ENST00000569378 2000 ntBASIC21.48■■□□□ 1.03
RARAP10276 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.48■■□□□ 1.03
RARAP10276 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RARAP10276 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RARAP10276 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.47■■□□□ 1.03
RARAP10276 RBM17P2-201ENST00000616397 1405 ntBASIC21.47■■□□□ 1.03
RARAP10276 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
RARAP10276 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 RARRES2P6-201ENST00000567333 442 ntBASIC21.47■■□□□ 1.03
RARAP10276 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.47■■□□□ 1.03
RARAP10276 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RARAP10276 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.47■■□□□ 1.03
RARAP10276 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RARAP10276 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RARAP10276 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.46■■□□□ 1.03
RARAP10276 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.46■■□□□ 1.03
RARAP10276 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RARAP10276 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.46■■□□□ 1.03
RARAP10276 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.46■■□□□ 1.03
RARAP10276 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RARAP10276 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RARAP10276 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RARAP10276 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.46■■□□□ 1.03
RARAP10276 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.46■■□□□ 1.03
RARAP10276 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.46■■□□□ 1.03
RARAP10276 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RARAP10276 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.46■■□□□ 1.03
RARAP10276 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.46■■□□□ 1.03
RARAP10276 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RARAP10276 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.46■■□□□ 1.03
RARAP10276 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.46■■□□□ 1.03
RARAP10276 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RARAP10276 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RARAP10276 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RARAP10276 AFG3L1P-217ENST00000557444 2447 ntBASIC21.45■■□□□ 1.02
RARAP10276 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RARAP10276 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 KRT18P5-201ENST00000436075 1291 ntBASIC21.45■■□□□ 1.02
RARAP10276 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.45■■□□□ 1.02
RARAP10276 AC243732.1-201ENST00000612648 864 ntBASIC21.45■■□□□ 1.02
RARAP10276 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.45■■□□□ 1.02
RARAP10276 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.45■■□□□ 1.02
RARAP10276 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RARAP10276 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RARAP10276 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.45■■□□□ 1.02
RARAP10276 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.45■■□□□ 1.02
RARAP10276 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RARAP10276 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RARAP10276 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.44■■□□□ 1.02
RARAP10276 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.44■■□□□ 1.02
RARAP10276 AC091799.1-201ENST00000422823 811 ntBASIC21.44■■□□□ 1.02
RARAP10276 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.44■■□□□ 1.02
RARAP10276 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.44■■□□□ 1.02
RARAP10276 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.44■■□□□ 1.02
RARAP10276 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.44■■□□□ 1.02
RARAP10276 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 AC112907.3-201ENST00000577781 2400 ntBASIC21.44■■□□□ 1.02
RARAP10276 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RARAP10276 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RARAP10276 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RARAP10276 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.43■■□□□ 1.02
RARAP10276 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.43■■□□□ 1.02
RARAP10276 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 MYCNOS-205ENST00000641950 531 ntBASIC21.43■■□□□ 1.02
RARAP10276 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.43■■□□□ 1.02
RARAP10276 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RARAP10276 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RARAP10276 AC116050.2-201ENST00000612102 1779 ntBASIC21.43■■□□□ 1.02
RARAP10276 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms