Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.91■□□□□ 0.46
UBCP0CG48 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 AL512408.1-201ENST00000569378 2000 ntBASIC17.91■□□□□ 0.46
UBCP0CG48 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
UBCP0CG48 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBCP0CG48 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.9■□□□□ 0.46
UBCP0CG48 SUDS3P1-201ENST00000505831 966 ntBASIC17.9■□□□□ 0.46
UBCP0CG48 AC138907.5-202ENST00000569484 235 ntBASIC17.9■□□□□ 0.46
UBCP0CG48 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
UBCP0CG48 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBCP0CG48 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBCP0CG48 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.9■□□□□ 0.46
UBCP0CG48 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBCP0CG48 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
UBCP0CG48 AC092720.2-201ENST00000602388 1665 ntBASIC17.9■□□□□ 0.46
UBCP0CG48 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBCP0CG48 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.89■□□□□ 0.46
UBCP0CG48 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.89■□□□□ 0.46
UBCP0CG48 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
UBCP0CG48 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.89■□□□□ 0.45
UBCP0CG48 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.89■□□□□ 0.45
UBCP0CG48 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.89■□□□□ 0.45
UBCP0CG48 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.89■□□□□ 0.45
UBCP0CG48 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBCP0CG48 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
UBCP0CG48 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBCP0CG48 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
UBCP0CG48 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBCP0CG48 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
UBCP0CG48 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
UBCP0CG48 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBCP0CG48 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.88■□□□□ 0.45
UBCP0CG48 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.88■□□□□ 0.45
UBCP0CG48 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.88■□□□□ 0.45
UBCP0CG48 RARRES2P11-201ENST00000635158 484 ntBASIC17.88■□□□□ 0.45
UBCP0CG48 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBCP0CG48 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBCP0CG48 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBCP0CG48 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.88■□□□□ 0.45
UBCP0CG48 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
UBCP0CG48 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.87■□□□□ 0.45
UBCP0CG48 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.87■□□□□ 0.45
UBCP0CG48 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
UBCP0CG48 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
UBCP0CG48 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBCP0CG48 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
UBCP0CG48 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms