Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNYL3P0C7X3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 FAM21FP-204ENST00000608637 956 ntBASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 MYC-209ENST00000641252 345 ntBASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNYL3P0C7X3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 AC083880.1-201ENST00000608266 535 ntBASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 AC005229.4-201ENST00000610085 2198 ntBASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNYL3P0C7X3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCNYL3P0C7X3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 AC091799.1-201ENST00000422823 811 ntBASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNYL3P0C7X3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 AC100791.3-201ENST00000617619 330 ntBASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.65■□□□□ 0.74
CCNYL3P0C7X3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms