Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RETP07949 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.67■□□□□ 0.9
RETP07949 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RETP07949 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
RETP07949 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.67■□□□□ 0.9
RETP07949 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.67■□□□□ 0.9
RETP07949 RCN1P1-201ENST00000400413 996 ntBASIC20.67■□□□□ 0.9
RETP07949 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.67■□□□□ 0.9
RETP07949 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.67■□□□□ 0.9
RETP07949 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.67■□□□□ 0.9
RETP07949 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RETP07949 AL049637.2-201ENST00000641778 930 ntBASIC20.67■□□□□ 0.9
RETP07949 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 AC061975.6-201ENST00000579045 1553 ntBASIC20.67■□□□□ 0.9
RETP07949 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RETP07949 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.67■□□□□ 0.9
RETP07949 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RETP07949 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.66■□□□□ 0.9
RETP07949 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.66■□□□□ 0.9
RETP07949 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RETP07949 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.66■□□□□ 0.9
RETP07949 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.66■□□□□ 0.9
RETP07949 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.66■□□□□ 0.9
RETP07949 AL445228.2-201ENST00000605589 952 ntBASIC20.66■□□□□ 0.9
RETP07949 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
RETP07949 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
RETP07949 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RETP07949 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.66■□□□□ 0.9
RETP07949 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RETP07949 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RETP07949 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.65■□□□□ 0.9
RETP07949 AL135905.2-201ENST00000584934 1404 ntBASIC20.65■□□□□ 0.9
RETP07949 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.65■□□□□ 0.9
RETP07949 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.65■□□□□ 0.9
RETP07949 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.65■□□□□ 0.9
RETP07949 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RETP07949 AC012306.2-201ENST00000609350 630 ntBASIC20.65■□□□□ 0.9
RETP07949 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RETP07949 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
RETP07949 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.64■□□□□ 0.89
RETP07949 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.64■□□□□ 0.89
RETP07949 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
RETP07949 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.64■□□□□ 0.89
RETP07949 AC091799.1-201ENST00000422823 811 ntBASIC20.64■□□□□ 0.89
RETP07949 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.64■□□□□ 0.89
RETP07949 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.64■□□□□ 0.89
RETP07949 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.64■□□□□ 0.89
RETP07949 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.64■□□□□ 0.89
RETP07949 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.64■□□□□ 0.89
RETP07949 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.64■□□□□ 0.89
RETP07949 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RETP07949 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RETP07949 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RETP07949 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.63■□□□□ 0.89
RETP07949 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.63■□□□□ 0.89
RETP07949 KRT18P68-201ENST00000392293 1000 ntBASIC20.63■□□□□ 0.89
RETP07949 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.63■□□□□ 0.89
RETP07949 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.63■□□□□ 0.89
RETP07949 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RETP07949 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.62■□□□□ 0.89
RETP07949 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
RETP07949 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms