Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
TRBC1P01850 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBC1P01850 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBC1P01850 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.53■□□□□ 0.88
TRBC1P01850 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.53■□□□□ 0.88
TRBC1P01850 MIR2861-201ENST00000636310 90 ntBASIC20.53■□□□□ 0.88
TRBC1P01850 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRBC1P01850 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.53■□□□□ 0.88
TRBC1P01850 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.53■□□□□ 0.88
TRBC1P01850 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.53■□□□□ 0.88
TRBC1P01850 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBC1P01850 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBC1P01850 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBC1P01850 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBC1P01850 KRT18P68-201ENST00000392293 1000 ntBASIC20.52■□□□□ 0.88
TRBC1P01850 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBC1P01850 MIPEPP3-201ENST00000412105 444 ntBASIC20.52■□□□□ 0.88
TRBC1P01850 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.52■□□□□ 0.88
TRBC1P01850 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.52■□□□□ 0.88
TRBC1P01850 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
TRBC1P01850 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBC1P01850 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBC1P01850 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
TRBC1P01850 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRBC1P01850 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.87
TRBC1P01850 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBC1P01850 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBC1P01850 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBC1P01850 BX276092.2-201ENST00000417668 665 ntBASIC20.51■□□□□ 0.87
TRBC1P01850 PGM5P4-201ENST00000421970 445 ntBASIC20.51■□□□□ 0.87
TRBC1P01850 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.51■□□□□ 0.87
TRBC1P01850 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.51■□□□□ 0.87
TRBC1P01850 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.51■□□□□ 0.87
TRBC1P01850 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRBC1P01850 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.51■□□□□ 0.87
TRBC1P01850 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRBC1P01850 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBC1P01850 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBC1P01850 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 KRT17P1-201ENST00000399211 1546 ntBASIC20.5■□□□□ 0.87
TRBC1P01850 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBC1P01850 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBC1P01850 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
TRBC1P01850 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBC1P01850 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBC1P01850 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBC1P01850 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TRBC1P01850 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBC1P01850 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRBC1P01850 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.49■□□□□ 0.87
TRBC1P01850 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.49■□□□□ 0.87
TRBC1P01850 AL138781.1-201ENST00000566567 1274 ntBASIC20.49■□□□□ 0.87
TRBC1P01850 AC142086.2-201ENST00000569753 217 ntBASIC20.49■□□□□ 0.87
TRBC1P01850 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.49■□□□□ 0.87
TRBC1P01850 AL356652.1-201ENST00000615962 565 ntBASIC20.49■□□□□ 0.87
TRBC1P01850 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.49■□□□□ 0.87
TRBC1P01850 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRBC1P01850 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.48■□□□□ 0.87
TRBC1P01850 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
TRBC1P01850 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRBC1P01850 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.48■□□□□ 0.87
TRBC1P01850 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms