Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ALDH1A1P00352 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
ALDH1A1P00352 TERF1P1-201ENST00000311003 1181 ntBASIC23.6■■□□□ 1.37
ALDH1A1P00352 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 NAPSB-206ENST00000562112 1266 ntBASIC23.6■■□□□ 1.37
ALDH1A1P00352 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ALDH1A1P00352 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ALDH1A1P00352 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.6■■□□□ 1.37
ALDH1A1P00352 KRT8P9-201ENST00000558927 1449 ntBASIC23.59■■□□□ 1.37
ALDH1A1P00352 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ALDH1A1P00352 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ALDH1A1P00352 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 AP000525.1-201ENST00000608286 694 ntBASIC23.59■■□□□ 1.37
ALDH1A1P00352 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ALDH1A1P00352 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ALDH1A1P00352 AC068473.5-201ENST00000616428 2072 ntBASIC23.59■■□□□ 1.37
ALDH1A1P00352 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ALDH1A1P00352 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ALDH1A1P00352 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.59■■□□□ 1.37
ALDH1A1P00352 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ALDH1A1P00352 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 NBPF21P-201ENST00000425093 1451 ntBASIC23.58■■□□□ 1.37
ALDH1A1P00352 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ALDH1A1P00352 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ALDH1A1P00352 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.58■■□□□ 1.37
ALDH1A1P00352 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.58■■□□□ 1.37
ALDH1A1P00352 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ALDH1A1P00352 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
ALDH1A1P00352 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
ALDH1A1P00352 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
ALDH1A1P00352 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
ALDH1A1P00352 AC073508.3-201ENST00000619697 1419 ntBASIC23.58■■□□□ 1.36
ALDH1A1P00352 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 MIR1238-201ENST00000408483 83 ntBASIC23.57■■□□□ 1.36
ALDH1A1P00352 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 NTF6B-201ENST00000591913 560 ntBASIC23.57■■□□□ 1.36
ALDH1A1P00352 REXO1L10P-201ENST00000615707 1290 ntBASIC23.57■■□□□ 1.36
ALDH1A1P00352 AL356652.1-201ENST00000615962 565 ntBASIC23.57■■□□□ 1.36
ALDH1A1P00352 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ALDH1A1P00352 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
ALDH1A1P00352 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ALDH1A1P00352 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ALDH1A1P00352 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ALDH1A1P00352 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 DUX4L26-201ENST00000489078 1255 ntBASIC23.56■■□□□ 1.36
ALDH1A1P00352 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 AC087388.1-201ENST00000571370 1112 ntBASIC23.56■■□□□ 1.36
ALDH1A1P00352 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
ALDH1A1P00352 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ALDH1A1P00352 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.55■■□□□ 1.36
ALDH1A1P00352 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.55■■□□□ 1.36
ALDH1A1P00352 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
ALDH1A1P00352 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.55■■□□□ 1.36
ALDH1A1P00352 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ALDH1A1P00352 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.54■■□□□ 1.36
ALDH1A1P00352 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ALDH1A1P00352 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
ALDH1A1P00352 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ALDH1A1P00352 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.54■■□□□ 1.36
ALDH1A1P00352 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.54■■□□□ 1.36
ALDH1A1P00352 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ALDH1A1P00352 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms