Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VAPBO95292 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
VAPBO95292 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VAPBO95292 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.55■□□□□ 0.88
VAPBO95292 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.55■□□□□ 0.88
VAPBO95292 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
VAPBO95292 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VAPBO95292 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.55■□□□□ 0.88
VAPBO95292 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.55■□□□□ 0.88
VAPBO95292 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VAPBO95292 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.55■□□□□ 0.88
VAPBO95292 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.55■□□□□ 0.88
VAPBO95292 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.55■□□□□ 0.88
VAPBO95292 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VAPBO95292 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.54■□□□□ 0.88
VAPBO95292 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.54■□□□□ 0.88
VAPBO95292 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.54■□□□□ 0.88
VAPBO95292 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.54■□□□□ 0.88
VAPBO95292 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.54■□□□□ 0.88
VAPBO95292 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.54■□□□□ 0.88
VAPBO95292 MYCNOS-205ENST00000641950 531 ntBASIC20.54■□□□□ 0.88
VAPBO95292 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VAPBO95292 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VAPBO95292 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.54■□□□□ 0.88
VAPBO95292 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.53■□□□□ 0.88
VAPBO95292 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
VAPBO95292 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VAPBO95292 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.53■□□□□ 0.88
VAPBO95292 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.53■□□□□ 0.88
VAPBO95292 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.53■□□□□ 0.88
VAPBO95292 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.53■□□□□ 0.88
VAPBO95292 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
VAPBO95292 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
VAPBO95292 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VAPBO95292 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VAPBO95292 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VAPBO95292 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.52■□□□□ 0.88
VAPBO95292 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
VAPBO95292 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VAPBO95292 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VAPBO95292 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VAPBO95292 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.52■□□□□ 0.88
VAPBO95292 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAPBO95292 AL391422.3-201ENST00000603791 2761 ntBASIC20.52■□□□□ 0.88
VAPBO95292 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAPBO95292 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VAPBO95292 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
VAPBO95292 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VAPBO95292 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VAPBO95292 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
VAPBO95292 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.52■□□□□ 0.87
VAPBO95292 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
VAPBO95292 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VAPBO95292 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.51■□□□□ 0.87
VAPBO95292 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.51■□□□□ 0.87
VAPBO95292 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.51■□□□□ 0.87
VAPBO95292 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
VAPBO95292 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VAPBO95292 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VAPBO95292 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms