Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USP1O94782 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.66■□□□□ 0.9
USP1O94782 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.66■□□□□ 0.9
USP1O94782 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.66■□□□□ 0.9
USP1O94782 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP1O94782 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.66■□□□□ 0.9
USP1O94782 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.66■□□□□ 0.9
USP1O94782 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.66■□□□□ 0.9
USP1O94782 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.66■□□□□ 0.9
USP1O94782 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP1O94782 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
USP1O94782 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
USP1O94782 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 AC004854.2-201ENST00000608450 1441 ntBASIC20.65■□□□□ 0.9
USP1O94782 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
USP1O94782 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
USP1O94782 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.65■□□□□ 0.9
USP1O94782 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.65■□□□□ 0.9
USP1O94782 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.65■□□□□ 0.9
USP1O94782 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP1O94782 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP1O94782 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.64■□□□□ 0.9
USP1O94782 AL162377.1-201ENST00000618844 1793 ntBASIC20.64■□□□□ 0.9
USP1O94782 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP1O94782 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP1O94782 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
USP1O94782 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
USP1O94782 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP1O94782 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.64■□□□□ 0.9
USP1O94782 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP1O94782 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
USP1O94782 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.64■□□□□ 0.89
USP1O94782 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.64■□□□□ 0.89
USP1O94782 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USP1O94782 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.64■□□□□ 0.89
USP1O94782 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.64■□□□□ 0.89
USP1O94782 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.64■□□□□ 0.89
USP1O94782 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
USP1O94782 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP1O94782 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.63■□□□□ 0.89
USP1O94782 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.63■□□□□ 0.89
USP1O94782 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.63■□□□□ 0.89
USP1O94782 SLC7A5P1-201ENST00000568957 537 ntBASIC20.63■□□□□ 0.89
USP1O94782 AC243732.1-201ENST00000612648 864 ntBASIC20.63■□□□□ 0.89
USP1O94782 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.63■□□□□ 0.89
USP1O94782 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
USP1O94782 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
USP1O94782 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.63■□□□□ 0.89
USP1O94782 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
USP1O94782 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP1O94782 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
USP1O94782 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP1O94782 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP1O94782 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP1O94782 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms