Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN3O60637 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN3O60637 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.13■□□□□ 0.97
TSPAN3O60637 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN3O60637 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
TSPAN3O60637 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN3O60637 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TSPAN3O60637 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TSPAN3O60637 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
TSPAN3O60637 AC026310.3-201ENST00000625186 2373 ntBASIC21.12■□□□□ 0.97
TSPAN3O60637 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 AC011484.1-201ENST00000377652 1995 ntBASIC21.12■□□□□ 0.97
TSPAN3O60637 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.12■□□□□ 0.97
TSPAN3O60637 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TSPAN3O60637 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN3O60637 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.12■□□□□ 0.97
TSPAN3O60637 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.12■□□□□ 0.97
TSPAN3O60637 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TSPAN3O60637 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
TSPAN3O60637 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN3O60637 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.11■□□□□ 0.97
TSPAN3O60637 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.11■□□□□ 0.97
TSPAN3O60637 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.11■□□□□ 0.97
TSPAN3O60637 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.11■□□□□ 0.97
TSPAN3O60637 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.11■□□□□ 0.97
TSPAN3O60637 AC121338.2-201ENST00000622535 1744 ntBASIC21.11■□□□□ 0.97
TSPAN3O60637 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TSPAN3O60637 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.11■□□□□ 0.97
TSPAN3O60637 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TSPAN3O60637 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.1■□□□□ 0.97
TSPAN3O60637 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.1■□□□□ 0.97
TSPAN3O60637 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.1■□□□□ 0.97
TSPAN3O60637 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.1■□□□□ 0.97
TSPAN3O60637 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TSPAN3O60637 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TSPAN3O60637 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.09■□□□□ 0.97
TSPAN3O60637 AC105020.6-201ENST00000621523 1217 ntBASIC21.09■□□□□ 0.97
TSPAN3O60637 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TSPAN3O60637 AC087633.2-202ENST00000565166 1439 ntBASIC21.09■□□□□ 0.97
TSPAN3O60637 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TSPAN3O60637 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TSPAN3O60637 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
TSPAN3O60637 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.08■□□□□ 0.97
TSPAN3O60637 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TSPAN3O60637 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.08■□□□□ 0.97
TSPAN3O60637 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.08■□□□□ 0.97
TSPAN3O60637 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TSPAN3O60637 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TSPAN3O60637 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TSPAN3O60637 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.08■□□□□ 0.96
TSPAN3O60637 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.08■□□□□ 0.96
TSPAN3O60637 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TSPAN3O60637 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.07■□□□□ 0.96
TSPAN3O60637 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.07■□□□□ 0.96
TSPAN3O60637 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.07■□□□□ 0.96
TSPAN3O60637 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.07■□□□□ 0.96
TSPAN3O60637 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TSPAN3O60637 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms