Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
NOBOXO60393 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.23■□□□□ 0.83
NOBOXO60393 AC093827.2-201ENST00000512654 315 ntBASIC20.23■□□□□ 0.83
NOBOXO60393 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
NOBOXO60393 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.23■□□□□ 0.83
NOBOXO60393 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.23■□□□□ 0.83
NOBOXO60393 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.23■□□□□ 0.83
NOBOXO60393 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.23■□□□□ 0.83
NOBOXO60393 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NOBOXO60393 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NOBOXO60393 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NOBOXO60393 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.22■□□□□ 0.83
NOBOXO60393 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.22■□□□□ 0.83
NOBOXO60393 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.22■□□□□ 0.83
NOBOXO60393 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.22■□□□□ 0.83
NOBOXO60393 AL355472.2-201ENST00000422958 438 ntBASIC20.22■□□□□ 0.83
NOBOXO60393 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 POU5F1P3-201ENST00000428824 1078 ntBASIC20.22■□□□□ 0.83
NOBOXO60393 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.22■□□□□ 0.83
NOBOXO60393 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.22■□□□□ 0.83
NOBOXO60393 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.22■□□□□ 0.83
NOBOXO60393 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NOBOXO60393 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NOBOXO60393 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NOBOXO60393 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.22■□□□□ 0.83
NOBOXO60393 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
NOBOXO60393 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NOBOXO60393 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.21■□□□□ 0.83
NOBOXO60393 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.21■□□□□ 0.83
NOBOXO60393 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NOBOXO60393 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.21■□□□□ 0.83
NOBOXO60393 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.21■□□□□ 0.83
NOBOXO60393 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.21■□□□□ 0.83
NOBOXO60393 AC100791.3-201ENST00000617619 330 ntBASIC20.21■□□□□ 0.83
NOBOXO60393 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NOBOXO60393 KRT17P1-201ENST00000399211 1546 ntBASIC20.21■□□□□ 0.83
NOBOXO60393 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NOBOXO60393 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NOBOXO60393 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
NOBOXO60393 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 LSM12P1-201ENST00000411836 588 ntBASIC20.2■□□□□ 0.82
NOBOXO60393 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NOBOXO60393 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
NOBOXO60393 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NOBOXO60393 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NOBOXO60393 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NOBOXO60393 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NOBOXO60393 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NOBOXO60393 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.19■□□□□ 0.82
NOBOXO60393 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.19■□□□□ 0.82
NOBOXO60393 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.19■□□□□ 0.82
NOBOXO60393 CYP2T3P-201ENST00000601990 817 ntBASIC20.19■□□□□ 0.82
NOBOXO60393 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 ITM2C-210ENST00000620962 501 ntBASIC20.19■□□□□ 0.82
NOBOXO60393 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms