Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SSX4O60224 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX4O60224 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSX4O60224 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSX4O60224 BX005040.4-201ENST00000637145 1518 ntBASIC18.49■□□□□ 0.55
SSX4O60224 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SSX4O60224 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSX4O60224 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX4O60224 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.48■□□□□ 0.55
SSX4O60224 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
SSX4O60224 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSX4O60224 TPRG1LP1-201ENST00000598702 760 ntBASIC18.48■□□□□ 0.55
SSX4O60224 AC080038.1-201ENST00000611274 1154 ntBASIC18.48■□□□□ 0.55
SSX4O60224 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX4O60224 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSX4O60224 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.48■□□□□ 0.55
SSX4O60224 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SSX4O60224 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.48■□□□□ 0.55
SSX4O60224 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.48■□□□□ 0.55
SSX4O60224 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.47■□□□□ 0.55
SSX4O60224 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 AC010141.3-201ENST00000456659 717 ntBASIC18.47■□□□□ 0.55
SSX4O60224 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX4O60224 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX4O60224 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.47■□□□□ 0.55
SSX4O60224 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SSX4O60224 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSX4O60224 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.47■□□□□ 0.55
SSX4O60224 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SSX4O60224 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.46■□□□□ 0.55
SSX4O60224 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.46■□□□□ 0.55
SSX4O60224 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.46■□□□□ 0.55
SSX4O60224 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SSX4O60224 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSX4O60224 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX4O60224 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSX4O60224 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSX4O60224 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SSX4O60224 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 AC112907.3-201ENST00000577781 2400 ntBASIC18.45■□□□□ 0.54
SSX4O60224 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SSX4O60224 AC018445.3-201ENST00000624177 1945 ntBASIC18.45■□□□□ 0.54
SSX4O60224 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSX4O60224 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.45■□□□□ 0.54
SSX4O60224 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSX4O60224 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.45■□□□□ 0.54
SSX4O60224 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX4O60224 KRT18P61-201ENST00000585825 1298 ntBASIC18.45■□□□□ 0.54
SSX4O60224 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX4O60224 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSX4O60224 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 AC026471.6-201ENST00000622954 1905 ntBASIC18.45■□□□□ 0.54
SSX4O60224 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX4O60224 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX4O60224 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.44■□□□□ 0.54
SSX4O60224 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SSX4O60224 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms