Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.45■□□□□ 0.38
SSNA1O43805 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.45■□□□□ 0.38
SSNA1O43805 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
SSNA1O43805 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 AL158211.5-201ENST00000623583 2518 ntBASIC17.45■□□□□ 0.38
SSNA1O43805 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSNA1O43805 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.45■□□□□ 0.38
SSNA1O43805 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.45■□□□□ 0.38
SSNA1O43805 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSNA1O43805 AC005703.6-201ENST00000623265 1329 ntBASIC17.45■□□□□ 0.38
SSNA1O43805 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.44■□□□□ 0.38
SSNA1O43805 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.44■□□□□ 0.38
SSNA1O43805 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSNA1O43805 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SSNA1O43805 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.44■□□□□ 0.38
SSNA1O43805 FP700111.2-201ENST00000619190 1892 ntBASIC17.44■□□□□ 0.38
SSNA1O43805 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SSNA1O43805 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SSNA1O43805 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 SNX5-217ENST00000606557 1087 ntBASIC17.44■□□□□ 0.38
SSNA1O43805 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.44■□□□□ 0.38
SSNA1O43805 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.44■□□□□ 0.38
SSNA1O43805 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.44■□□□□ 0.38
SSNA1O43805 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SSNA1O43805 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSNA1O43805 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 TCF3P1-201ENST00000423021 1937 ntBASIC17.43■□□□□ 0.38
SSNA1O43805 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.43■□□□□ 0.38
SSNA1O43805 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.43■□□□□ 0.38
SSNA1O43805 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SSNA1O43805 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SSNA1O43805 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.43■□□□□ 0.38
SSNA1O43805 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.43■□□□□ 0.38
SSNA1O43805 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSNA1O43805 PKD1P1-201ENST00000458669 6805 ntBASIC17.43■□□□□ 0.38
SSNA1O43805 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.42■□□□□ 0.38
SSNA1O43805 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.42■□□□□ 0.38
SSNA1O43805 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.42■□□□□ 0.38
SSNA1O43805 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 HTR7P1-202ENST00000624664 4411 ntBASIC17.42■□□□□ 0.38
SSNA1O43805 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SSNA1O43805 AC003102.1-202ENST00000563394 1796 ntBASIC17.42■□□□□ 0.38
SSNA1O43805 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSNA1O43805 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SSNA1O43805 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.42■□□□□ 0.38
SSNA1O43805 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.41■□□□□ 0.38
SSNA1O43805 AC019171.1-201ENST00000601251 1056 ntBASIC17.41■□□□□ 0.38
SSNA1O43805 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 AP004607.7-201ENST00000527152 1677 ntBASIC17.41■□□□□ 0.38
SSNA1O43805 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSNA1O43805 AC005082.1-201ENST00000413042 2259 ntBASIC17.41■□□□□ 0.38
SSNA1O43805 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms