Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.76■□□□□ 0.43
XRCC2O43543 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
XRCC2O43543 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
XRCC2O43543 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
XRCC2O43543 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
XRCC2O43543 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
XRCC2O43543 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.75■□□□□ 0.43
XRCC2O43543 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.75■□□□□ 0.43
XRCC2O43543 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
XRCC2O43543 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
XRCC2O43543 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
XRCC2O43543 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.75■□□□□ 0.43
XRCC2O43543 RARRES2P6-201ENST00000567333 442 ntBASIC17.75■□□□□ 0.43
XRCC2O43543 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.75■□□□□ 0.43
XRCC2O43543 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
XRCC2O43543 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.75■□□□□ 0.43
XRCC2O43543 AL121603.2-201ENST00000557373 2117 ntBASIC17.75■□□□□ 0.43
XRCC2O43543 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.75■□□□□ 0.43
XRCC2O43543 AP005212.1-201ENST00000581547 1997 ntBASIC17.75■□□□□ 0.43
XRCC2O43543 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 AC092667.1-201ENST00000434301 2586 ntBASIC17.75■□□□□ 0.43
XRCC2O43543 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
XRCC2O43543 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.75■□□□□ 0.43
XRCC2O43543 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
XRCC2O43543 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.74■□□□□ 0.43
XRCC2O43543 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
XRCC2O43543 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
XRCC2O43543 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.74■□□□□ 0.43
XRCC2O43543 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.74■□□□□ 0.43
XRCC2O43543 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
XRCC2O43543 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 AC137761.2-201ENST00000561729 223 ntBASIC17.74■□□□□ 0.43
XRCC2O43543 AC145350.3-201ENST00000569033 163 ntBASIC17.74■□□□□ 0.43
XRCC2O43543 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.74■□□□□ 0.43
XRCC2O43543 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.74■□□□□ 0.43
XRCC2O43543 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
XRCC2O43543 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.74■□□□□ 0.43
XRCC2O43543 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.73■□□□□ 0.43
XRCC2O43543 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
XRCC2O43543 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC2O43543 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
XRCC2O43543 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
XRCC2O43543 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC2O43543 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC2O43543 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
XRCC2O43543 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
XRCC2O43543 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
XRCC2O43543 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.73■□□□□ 0.43
XRCC2O43543 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.73■□□□□ 0.43
XRCC2O43543 KRT18P5-201ENST00000436075 1291 ntBASIC17.73■□□□□ 0.43
XRCC2O43543 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.73■□□□□ 0.43
XRCC2O43543 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.73■□□□□ 0.43
XRCC2O43543 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.73■□□□□ 0.43
XRCC2O43543 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.73■□□□□ 0.43
XRCC2O43543 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
XRCC2O43543 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
XRCC2O43543 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.72■□□□□ 0.43
XRCC2O43543 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 LINC01006-201ENST00000333319 2292 ntBASIC17.72■□□□□ 0.43
XRCC2O43543 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
XRCC2O43543 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.72■□□□□ 0.43
XRCC2O43543 AC026271.2-201ENST00000428091 497 ntBASIC17.72■□□□□ 0.43
XRCC2O43543 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
XRCC2O43543 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.72■□□□□ 0.43
XRCC2O43543 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
XRCC2O43543 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms