Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHGDHO43175 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHGDHO43175 YBX1P1-201ENST00000445822 960 ntBASIC20.34■□□□□ 0.85
PHGDHO43175 CCDC92B-201ENST00000575506 885 ntBASIC20.34■□□□□ 0.85
PHGDHO43175 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHGDHO43175 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.34■□□□□ 0.85
PHGDHO43175 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.34■□□□□ 0.85
PHGDHO43175 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.34■□□□□ 0.85
PHGDHO43175 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.33■□□□□ 0.85
PHGDHO43175 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.33■□□□□ 0.85
PHGDHO43175 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.33■□□□□ 0.85
PHGDHO43175 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PHGDHO43175 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.33■□□□□ 0.85
PHGDHO43175 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PHGDHO43175 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PHGDHO43175 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.33■□□□□ 0.85
PHGDHO43175 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.33■□□□□ 0.85
PHGDHO43175 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.33■□□□□ 0.85
PHGDHO43175 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.33■□□□□ 0.85
PHGDHO43175 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.33■□□□□ 0.85
PHGDHO43175 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.33■□□□□ 0.85
PHGDHO43175 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.33■□□□□ 0.85
PHGDHO43175 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.33■□□□□ 0.85
PHGDHO43175 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PHGDHO43175 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.33■□□□□ 0.84
PHGDHO43175 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PHGDHO43175 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.32■□□□□ 0.84
PHGDHO43175 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
PHGDHO43175 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.32■□□□□ 0.84
PHGDHO43175 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PHGDHO43175 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.32■□□□□ 0.84
PHGDHO43175 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.32■□□□□ 0.84
PHGDHO43175 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.32■□□□□ 0.84
PHGDHO43175 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.32■□□□□ 0.84
PHGDHO43175 AC004854.2-201ENST00000608450 1441 ntBASIC20.32■□□□□ 0.84
PHGDHO43175 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PHGDHO43175 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PHGDHO43175 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PHGDHO43175 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
PHGDHO43175 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHGDHO43175 AC099778.1-201ENST00000568593 1911 ntBASIC20.31■□□□□ 0.84
PHGDHO43175 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PHGDHO43175 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHGDHO43175 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHGDHO43175 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHGDHO43175 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHGDHO43175 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.31■□□□□ 0.84
PHGDHO43175 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PHGDHO43175 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.31■□□□□ 0.84
PHGDHO43175 KRT18P14-201ENST00000534205 1250 ntBASIC20.31■□□□□ 0.84
PHGDHO43175 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.31■□□□□ 0.84
PHGDHO43175 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.31■□□□□ 0.84
PHGDHO43175 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHGDHO43175 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PHGDHO43175 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.31■□□□□ 0.84
PHGDHO43175 AC092720.2-201ENST00000602388 1665 ntBASIC20.31■□□□□ 0.84
PHGDHO43175 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHGDHO43175 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PHGDHO43175 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PHGDHO43175 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.3■□□□□ 0.84
PHGDHO43175 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.3■□□□□ 0.84
PHGDHO43175 ZNRF2P3-201ENST00000424200 374 ntBASIC20.3■□□□□ 0.84
PHGDHO43175 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.3■□□□□ 0.84
PHGDHO43175 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.3■□□□□ 0.84
PHGDHO43175 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.3■□□□□ 0.84
PHGDHO43175 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.3■□□□□ 0.84
PHGDHO43175 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHGDHO43175 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PHGDHO43175 AC116050.2-201ENST00000612102 1779 ntBASIC20.3■□□□□ 0.84
PHGDHO43175 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHGDHO43175 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHGDHO43175 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.3■□□□□ 0.84
PHGDHO43175 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHGDHO43175 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PHGDHO43175 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.3■□□□□ 0.84
PHGDHO43175 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
PHGDHO43175 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.29■□□□□ 0.84
PHGDHO43175 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PHGDHO43175 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PHGDHO43175 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PHGDHO43175 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms