Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.53■□□□□ 0.56
SMAD9O15198 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SMAD9O15198 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.53■□□□□ 0.56
SMAD9O15198 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMAD9O15198 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.52■□□□□ 0.56
SMAD9O15198 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SMAD9O15198 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMAD9O15198 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD9O15198 AC068338.2-201ENST00000563278 1430 ntBASIC18.52■□□□□ 0.56
SMAD9O15198 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD9O15198 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SMAD9O15198 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SMAD9O15198 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMAD9O15198 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.52■□□□□ 0.56
SMAD9O15198 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.52■□□□□ 0.56
SMAD9O15198 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.52■□□□□ 0.56
SMAD9O15198 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.52■□□□□ 0.56
SMAD9O15198 AC090192.1-201ENST00000517740 490 ntBASIC18.52■□□□□ 0.56
SMAD9O15198 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.52■□□□□ 0.56
SMAD9O15198 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.52■□□□□ 0.56
SMAD9O15198 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SMAD9O15198 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SMAD9O15198 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD9O15198 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD9O15198 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD9O15198 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SMAD9O15198 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD9O15198 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD9O15198 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMAD9O15198 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.51■□□□□ 0.55
SMAD9O15198 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 CROCCP5-201ENST00000436658 830 ntBASIC18.51■□□□□ 0.55
SMAD9O15198 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD9O15198 AC005181.1-201ENST00000604782 1256 ntBASIC18.51■□□□□ 0.55
SMAD9O15198 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.51■□□□□ 0.55
SMAD9O15198 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.51■□□□□ 0.55
SMAD9O15198 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.51■□□□□ 0.55
SMAD9O15198 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SMAD9O15198 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMAD9O15198 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SMAD9O15198 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 MIR663A-201ENST00000385250 93 ntBASIC18.5■□□□□ 0.55
SMAD9O15198 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.5■□□□□ 0.55
SMAD9O15198 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 AL591742.1-201ENST00000604433 565 ntBASIC18.5■□□□□ 0.55
SMAD9O15198 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.5■□□□□ 0.55
SMAD9O15198 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMAD9O15198 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMAD9O15198 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 CYP2T1P-201ENST00000432607 1285 ntBASIC18.49■□□□□ 0.55
SMAD9O15198 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.49■□□□□ 0.55
SMAD9O15198 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMAD9O15198 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SMAD9O15198 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms