Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAFD1O14545 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAFD1O14545 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAFD1O14545 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAFD1O14545 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAFD1O14545 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAFD1O14545 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAFD1O14545 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRAFD1O14545 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAFD1O14545 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRAFD1O14545 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAFD1O14545 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAFD1O14545 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAFD1O14545 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
TRAFD1O14545 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRAFD1O14545 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAFD1O14545 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAFD1O14545 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRAFD1O14545 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TRAFD1O14545 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAFD1O14545 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAFD1O14545 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 AL050303.2-201ENST00000619798 666 ntBASIC20.94■□□□□ 0.94
TRAFD1O14545 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAFD1O14545 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRAFD1O14545 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAFD1O14545 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRAFD1O14545 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAFD1O14545 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAFD1O14545 AC005181.1-201ENST00000604782 1256 ntBASIC20.93■□□□□ 0.94
TRAFD1O14545 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAFD1O14545 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
TRAFD1O14545 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAFD1O14545 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAFD1O14545 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAFD1O14545 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAFD1O14545 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAFD1O14545 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAFD1O14545 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRAFD1O14545 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAFD1O14545 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAFD1O14545 MIR663A-201ENST00000385250 93 ntBASIC20.92■□□□□ 0.94
TRAFD1O14545 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.92■□□□□ 0.94
TRAFD1O14545 AL162412.1-201ENST00000567129 965 ntBASIC20.92■□□□□ 0.94
TRAFD1O14545 AL591742.1-201ENST00000604433 565 ntBASIC20.92■□□□□ 0.94
TRAFD1O14545 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAFD1O14545 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAFD1O14545 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAFD1O14545 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRAFD1O14545 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAFD1O14545 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAFD1O14545 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAFD1O14545 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAFD1O14545 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAFD1O14545 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAFD1O14545 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAFD1O14545 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAFD1O14545 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAFD1O14545 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms