Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YLR154W-EYLR154W-E 204 nt2.46□□□□□ -2.02
TY1B-AO13527 YNL179CYNL179C 438 nt2.46□□□□□ -2.02
TY1B-AO13527 DGK1YOR311C 873 nt2.46□□□□□ -2.02
TY1B-AO13527 YCL023CYCL023C 348 nt2.46□□□□□ -2.02
TY1B-AO13527 UTP22YGR090W 3714 nt2.45□□□□□ -2.02
TY1B-AO13527 PSK2YOL045W 3306 nt2.45□□□□□ -2.02
TY1B-AO13527 TIF35YDR429C 825 nt2.45□□□□□ -2.02
TY1B-AO13527 GCN4YEL009C 846 nt2.45□□□□□ -2.02
TY1B-AO13527 MPO1YGL010W 525 nt2.45□□□□□ -2.02
TY1B-AO13527 CBF2YGR140W 2871 nt2.45□□□□□ -2.02
TY1B-AO13527 SNF12YNR023W 1701 nt2.45□□□□□ -2.02
TY1B-AO13527 SSE1YPL106C 2082 nt2.45□□□□□ -2.02
TY1B-AO13527 RRI2YOL117W 1938 nt2.44□□□□□ -2.02
TY1B-AO13527 GPI17YDR434W 1605 nt2.44□□□□□ -2.02
TY1B-AO13527 GLC7YER133W 939 nt2.44□□□□□ -2.02
TY1B-AO13527 EMC4YGL231C 573 nt2.44□□□□□ -2.02
TY1B-AO13527 DFG10YIL049W 762 nt2.44□□□□□ -2.02
TY1B-AO13527 HRI1YLR301W 735 nt2.44□□□□□ -2.02
TY1B-AO13527 NSL1YPL233W 651 nt2.44□□□□□ -2.02
TY1B-AO13527 YGL042CYGL042C 306 nt2.43□□□□□ -2.02
TY1B-AO13527 YLR154W-AYLR154W-A 186 nt2.43□□□□□ -2.02
TY1B-AO13527 SAS2YMR127C 1017 nt2.43□□□□□ -2.02
TY1B-AO13527 HHT2YNL031C 411 nt2.43□□□□□ -2.02
TY1B-AO13527 ARR2YPR200C 393 nt2.43□□□□□ -2.02
TY1B-AO13527 YCR081C-AYCR081C-A 237 nt2.42□□□□□ -2.02
TY1B-AO13527 IGO1YNL157W 507 nt2.42□□□□□ -2.02
TY1B-AO13527 RIO2YNL207W 1278 nt2.42□□□□□ -2.02
TY1B-AO13527 ARF3YOR094W 552 nt2.42□□□□□ -2.02
TY1B-AO13527 YPL034WYPL034W 498 nt2.42□□□□□ -2.02
TY1B-AO13527 VMA9YCL005W-A 222 nt2.42□□□□□ -2.02
TY1B-AO13527 TOR2YKL203C 7425 nt2.42□□□□□ -2.02
TY1B-AO13527 FAB1YFR019W 6837 nt2.41□□□□□ -2.02
TY1B-AO13527 ACB1YGR037C 264 nt2.41□□□□□ -2.02
TY1B-AO13527 CLN3YAL040C 1743 nt2.4□□□□□ -2.02
TY1B-AO13527 SSF1YHR066W 1362 nt2.4□□□□□ -2.02
TY1B-AO13527 YDR029WYDR029W 315 nt2.4□□□□□ -2.03
TY1B-AO13527 TSA2YDR453C 591 nt2.4□□□□□ -2.03
TY1B-AO13527 YDR509WYDR509W 348 nt2.4□□□□□ -2.03
TY1B-AO13527 RPL29YFR032C-A 180 nt2.4□□□□□ -2.03
TY1B-AO13527 YIL029CYIL029C 429 nt2.4□□□□□ -2.03
TY1B-AO13527 MPH1YIR002C 2982 nt2.4□□□□□ -2.03
TY1B-AO13527 RLP24YLR009W 600 nt2.4□□□□□ -2.03
TY1B-AO13527 YLR252WYLR252W 306 nt2.4□□□□□ -2.03
TY1B-AO13527 YLR255CYLR255C 354 nt2.4□□□□□ -2.03
TY1B-AO13527 YMR304C-AYMR304C-A 351 nt2.4□□□□□ -2.03
TY1B-AO13527 YNR021WYNR021W 1215 nt2.4□□□□□ -2.03
TY1B-AO13527 MEI5YPL121C 669 nt2.4□□□□□ -2.03
TY1B-AO13527 ALK2YBL009W 2031 nt2.4□□□□□ -2.03
TY1B-AO13527 MCD1YDL003W 1701 nt2.39□□□□□ -2.03
TY1B-AO13527 LEU3YLR451W 2661 nt2.39□□□□□ -2.03
TY1B-AO13527 GYP5YPL249C 2685 nt2.39□□□□□ -2.03
TY1B-AO13527 snR84snR84 550 nt2.39□□□□□ -2.03
TY1B-AO13527 BET4YJL031C 984 nt2.39□□□□□ -2.03
TY1B-AO13527 YLR302CYLR302C 363 nt2.39□□□□□ -2.03
TY1B-AO13527 BI4Q0120 1917 nt2.38□□□□□ -2.03
TY1B-AO13527 SSF2YDR312W 1362 nt2.38□□□□□ -2.03
TY1B-AO13527 ECM25YJL201W 1800 nt2.38□□□□□ -2.03
TY1B-AO13527 DNF1YER166W 4716 nt2.38□□□□□ -2.03
TY1B-AO13527 EMP24YGL200C 612 nt2.38□□□□□ -2.03
TY1B-AO13527 YJR141WYJR141W 1044 nt2.38□□□□□ -2.03
TY1B-AO13527 YBR071WYBR071W 636 nt2.38□□□□□ -2.03
TY1B-AO13527 YPR096CYPR096C 303 nt2.38□□□□□ -2.03
TY1B-AO13527 YPR089WYPR089W 2667 nt2.38□□□□□ -2.03
TY1B-AO13527 YDR210W-AYDR210W-A 1317 nt2.38□□□□□ -2.03
TY1B-AO13527 YOR343W-AYOR343W-A 1317 nt2.38□□□□□ -2.03
TY1B-AO13527 YNL034WYNL034W 1839 nt2.38□□□□□ -2.03
TY1B-AO13527 SPR3YGR059W 1539 nt2.37□□□□□ -2.03
TY1B-AO13527 TFC3YAL001C 3483 nt2.37□□□□□ -2.03
TY1B-AO13527 VPS16YPL045W 2397 nt2.37□□□□□ -2.03
TY1B-AO13527 PRP6YBR055C 2700 nt2.37□□□□□ -2.03
TY1B-AO13527 YGL015CYGL015C 393 nt2.37□□□□□ -2.03
TY1B-AO13527 RAD6YGL058W 519 nt2.37□□□□□ -2.03
TY1B-AO13527 LAG1YHL003C 1236 nt2.37□□□□□ -2.03
TY1B-AO13527 PRS3YHL011C 963 nt2.37□□□□□ -2.03
TY1B-AO13527 YIR020CYIR020C 303 nt2.37□□□□□ -2.03
TY1B-AO13527 YMR013C-AYMR013C-A 150 nt2.37□□□□□ -2.03
TY1B-AO13527 CSI1YMR025W 888 nt2.37□□□□□ -2.03
TY1B-AO13527 SWS2YNL081C 432 nt2.37□□□□□ -2.03
TY1B-AO13527 YBR197CYBR197C 654 nt2.37□□□□□ -2.03
TY1B-AO13527 Q0017Q0017 162 nt2.37□□□□□ -2.03
TY1B-AO13527 PSO2YMR137C 1986 nt2.37□□□□□ -2.03
TY1B-AO13527 ECM5YMR176W 4236 nt2.37□□□□□ -2.03
TY1B-AO13527 RTT101YJL047C 2529 nt2.37□□□□□ -2.03
TY1B-AO13527 IRC8YJL051W 2469 nt2.36□□□□□ -2.03
TY1B-AO13527 SPO13YHR014W 876 nt2.36□□□□□ -2.03
TY1B-AO13527 RRF1YHR038W 693 nt2.36□□□□□ -2.03
TY1B-AO13527 YJL052C-AYJL052C-A 120 nt2.36□□□□□ -2.03
TY1B-AO13527 STE18YJR086W 333 nt2.36□□□□□ -2.03
TY1B-AO13527 AFB1YLR040C 675 nt2.36□□□□□ -2.03
TY1B-AO13527 LSM2YBL026W 288 nt2.36□□□□□ -2.03
TY1B-AO13527 YPL080CYPL080C 327 nt2.36□□□□□ -2.03
TY1B-AO13527 RAV1YJR033C 4074 nt2.36□□□□□ -2.03
TY1B-AO13527 KOG1YHR186C 4674 nt2.36□□□□□ -2.03
TY1B-AO13527 CSF1YLR087C 8877 nt2.36□□□□□ -2.03
TY1B-AO13527 SAC3YDR159W 3906 nt2.35□□□□□ -2.03
TY1B-AO13527 TAE2YPL009C 3117 nt2.35□□□□□ -2.03
TY1B-AO13527 YDL016CYDL016C 303 nt2.35□□□□□ -2.03
TY1B-AO13527 BUD19YJL188C 309 nt2.35□□□□□ -2.03
TY1B-AO13527 ARV1YLR242C 966 nt2.35□□□□□ -2.03
TY1B-AO13527 BER1YLR412W 825 nt2.35□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 49.5 ms