Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
RTCAO00442 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
RTCAO00442 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 CDV3P1-201ENST00000471403 739 ntBASIC19.53■□□□□ 0.72
RTCAO00442 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
RTCAO00442 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.53■□□□□ 0.72
RTCAO00442 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
RTCAO00442 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RTCAO00442 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTCAO00442 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.52■□□□□ 0.72
RTCAO00442 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RTCAO00442 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTCAO00442 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTCAO00442 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTCAO00442 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RTCAO00442 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RTCAO00442 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.52■□□□□ 0.72
RTCAO00442 AC007322.4-201ENST00000509611 723 ntBASIC19.52■□□□□ 0.72
RTCAO00442 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTCAO00442 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RTCAO00442 AC080038.1-201ENST00000611274 1154 ntBASIC19.52■□□□□ 0.72
RTCAO00442 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.52■□□□□ 0.72
RTCAO00442 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.52■□□□□ 0.72
RTCAO00442 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTCAO00442 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RTCAO00442 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTCAO00442 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
RTCAO00442 AC068338.2-201ENST00000563278 1430 ntBASIC19.51■□□□□ 0.71
RTCAO00442 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RTCAO00442 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.51■□□□□ 0.71
RTCAO00442 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.51■□□□□ 0.71
RTCAO00442 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.51■□□□□ 0.71
RTCAO00442 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.51■□□□□ 0.71
RTCAO00442 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.51■□□□□ 0.71
RTCAO00442 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RTCAO00442 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RTCAO00442 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTCAO00442 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.51■□□□□ 0.71
RTCAO00442 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RTCAO00442 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.5■□□□□ 0.71
RTCAO00442 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.5■□□□□ 0.71
RTCAO00442 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.5■□□□□ 0.71
RTCAO00442 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.5■□□□□ 0.71
RTCAO00442 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.5■□□□□ 0.71
RTCAO00442 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.5■□□□□ 0.71
RTCAO00442 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTCAO00442 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.49■□□□□ 0.71
RTCAO00442 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
RTCAO00442 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RTCAO00442 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.49■□□□□ 0.71
RTCAO00442 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTCAO00442 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTCAO00442 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.49■□□□□ 0.71
RTCAO00442 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RTCAO00442 AC007322.1-201ENST00000426983 750 ntBASIC19.49■□□□□ 0.71
RTCAO00442 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.49■□□□□ 0.71
RTCAO00442 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTCAO00442 AC073111.5-205ENST00000641717 521 ntBASIC19.49■□□□□ 0.71
RTCAO00442 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.49■□□□□ 0.71
RTCAO00442 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTCAO00442 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.49■□□□□ 0.71
RTCAO00442 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RTCAO00442 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTCAO00442 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms