Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXN3O00409 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
FOXN3O00409 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.94■■□□□ 1.1
FOXN3O00409 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXN3O00409 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXN3O00409 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
FOXN3O00409 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
FOXN3O00409 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXN3O00409 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
FOXN3O00409 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXN3O00409 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
FOXN3O00409 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
FOXN3O00409 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 AL162430.1-201ENST00000480705 870 ntBASIC21.93■■□□□ 1.1
FOXN3O00409 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
FOXN3O00409 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.93■■□□□ 1.1
FOXN3O00409 AL162377.1-201ENST00000618844 1793 ntBASIC21.93■■□□□ 1.1
FOXN3O00409 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.93■■□□□ 1.1
FOXN3O00409 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXN3O00409 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXN3O00409 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
FOXN3O00409 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
FOXN3O00409 KRT18P11-201ENST00000435214 1283 ntBASIC21.92■■□□□ 1.1
FOXN3O00409 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
FOXN3O00409 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.92■■□□□ 1.1
FOXN3O00409 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
FOXN3O00409 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXN3O00409 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXN3O00409 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 AL391422.3-201ENST00000603791 2761 ntBASIC21.92■■□□□ 1.1
FOXN3O00409 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXN3O00409 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
FOXN3O00409 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
FOXN3O00409 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 CDV3P1-201ENST00000471403 739 ntBASIC21.91■■□□□ 1.1
FOXN3O00409 MFSD11-216ENST00000590393 1141 ntBASIC21.91■■□□□ 1.1
FOXN3O00409 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
FOXN3O00409 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.91■■□□□ 1.1
FOXN3O00409 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 AC092720.2-201ENST00000602388 1665 ntBASIC21.91■■□□□ 1.1
FOXN3O00409 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.91■■□□□ 1.1
FOXN3O00409 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXN3O00409 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
FOXN3O00409 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXN3O00409 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXN3O00409 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
FOXN3O00409 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
FOXN3O00409 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXN3O00409 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.9■■□□□ 1.1
FOXN3O00409 AC006015.1-201ENST00000429970 570 ntBASIC21.9■■□□□ 1.1
FOXN3O00409 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 MIR5787-201ENST00000611784 55 ntBASIC21.9■■□□□ 1.1
FOXN3O00409 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXN3O00409 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms