Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC28A1O00337 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC28A1O00337 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC28A1O00337 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC28A1O00337 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC28A1O00337 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SLC28A1O00337 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC28A1O00337 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SLC28A1O00337 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC28A1O00337 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC28A1O00337 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC28A1O00337 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SLC28A1O00337 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC28A1O00337 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC28A1O00337 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC28A1O00337 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.68■□□□□ 0.74
SLC28A1O00337 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC28A1O00337 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC28A1O00337 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC28A1O00337 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC28A1O00337 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC28A1O00337 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC28A1O00337 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC28A1O00337 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC28A1O00337 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC28A1O00337 AC243732.1-201ENST00000612648 864 ntBASIC19.67■□□□□ 0.74
SLC28A1O00337 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC28A1O00337 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC28A1O00337 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SLC28A1O00337 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SLC28A1O00337 KRT18P14-201ENST00000534205 1250 ntBASIC19.66■□□□□ 0.74
SLC28A1O00337 SLC7A5P1-201ENST00000568957 537 ntBASIC19.66■□□□□ 0.74
SLC28A1O00337 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.66■□□□□ 0.74
SLC28A1O00337 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SLC28A1O00337 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SLC28A1O00337 AC099778.1-201ENST00000568593 1911 ntBASIC19.66■□□□□ 0.74
SLC28A1O00337 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SLC28A1O00337 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC28A1O00337 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC28A1O00337 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC28A1O00337 AL391422.3-201ENST00000603791 2761 ntBASIC19.65■□□□□ 0.74
SLC28A1O00337 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC28A1O00337 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC28A1O00337 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC28A1O00337 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC28A1O00337 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC28A1O00337 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC28A1O00337 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC28A1O00337 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms