Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.1■□□□□ 0.81
CDC7O00311 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CDC7O00311 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CDC7O00311 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CDC7O00311 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC7O00311 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDC7O00311 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC7O00311 KRT18P5-201ENST00000436075 1291 ntBASIC20.09■□□□□ 0.81
CDC7O00311 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC7O00311 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC7O00311 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC7O00311 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.09■□□□□ 0.81
CDC7O00311 MIR2861-201ENST00000636310 90 ntBASIC20.09■□□□□ 0.81
CDC7O00311 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
CDC7O00311 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CDC7O00311 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.09■□□□□ 0.81
CDC7O00311 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDC7O00311 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CDC7O00311 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CDC7O00311 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 AC007322.3-201ENST00000426526 701 ntBASIC20.08■□□□□ 0.81
CDC7O00311 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDC7O00311 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.08■□□□□ 0.81
CDC7O00311 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.08■□□□□ 0.81
CDC7O00311 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.08■□□□□ 0.81
CDC7O00311 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CDC7O00311 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.08■□□□□ 0.8
CDC7O00311 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDC7O00311 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDC7O00311 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CDC7O00311 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.08■□□□□ 0.8
CDC7O00311 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDC7O00311 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC7O00311 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC7O00311 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC7O00311 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDC7O00311 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC7O00311 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC7O00311 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDC7O00311 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC7O00311 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.07■□□□□ 0.8
CDC7O00311 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDC7O00311 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.07■□□□□ 0.8
CDC7O00311 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDC7O00311 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC7O00311 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDC7O00311 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC7O00311 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC7O00311 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDC7O00311 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.06■□□□□ 0.8
CDC7O00311 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.06■□□□□ 0.8
CDC7O00311 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDC7O00311 RARRES2P6-201ENST00000567333 442 ntBASIC20.06■□□□□ 0.8
CDC7O00311 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.06■□□□□ 0.8
CDC7O00311 PCDHAC2-203ENST00000615316 3011 ntBASIC20.06■□□□□ 0.8
CDC7O00311 AC092720.2-201ENST00000602388 1665 ntBASIC20.06■□□□□ 0.8
CDC7O00311 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDC7O00311 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDC7O00311 AL162377.1-201ENST00000618844 1793 ntBASIC20.06■□□□□ 0.8
CDC7O00311 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC7O00311 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.05■□□□□ 0.8
CDC7O00311 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDC7O00311 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.05■□□□□ 0.8
CDC7O00311 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDC7O00311 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.05■□□□□ 0.8
CDC7O00311 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDC7O00311 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CDC7O00311 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDC7O00311 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms