Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM1O00151 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PDLIM1O00151 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PDLIM1O00151 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.43■□□□□ 0.7
PDLIM1O00151 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDLIM1O00151 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM1O00151 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 AL162377.1-201ENST00000618844 1793 ntBASIC19.43■□□□□ 0.7
PDLIM1O00151 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDLIM1O00151 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM1O00151 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM1O00151 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDLIM1O00151 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDLIM1O00151 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PDLIM1O00151 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM1O00151 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PDLIM1O00151 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PDLIM1O00151 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDLIM1O00151 AC121338.2-201ENST00000622535 1744 ntBASIC19.42■□□□□ 0.7
PDLIM1O00151 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM1O00151 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.42■□□□□ 0.7
PDLIM1O00151 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDLIM1O00151 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM1O00151 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.42■□□□□ 0.7
PDLIM1O00151 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDLIM1O00151 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM1O00151 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.42■□□□□ 0.7
PDLIM1O00151 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM1O00151 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.41■□□□□ 0.7
PDLIM1O00151 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 TNXA-203ENST00000507684 2038 ntBASIC19.41■□□□□ 0.7
PDLIM1O00151 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM1O00151 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 AC099791.1-201ENST00000416440 715 ntBASIC19.41■□□□□ 0.7
PDLIM1O00151 AC010525.1-201ENST00000585559 441 ntBASIC19.41■□□□□ 0.7
PDLIM1O00151 AC008764.7-201ENST00000593779 1081 ntBASIC19.41■□□□□ 0.7
PDLIM1O00151 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM1O00151 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.41■□□□□ 0.7
PDLIM1O00151 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 AC099778.1-201ENST00000568593 1911 ntBASIC19.41■□□□□ 0.7
PDLIM1O00151 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM1O00151 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDLIM1O00151 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM1O00151 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 AC068587.7-201ENST00000641602 218 ntBASIC19.4■□□□□ 0.7
PDLIM1O00151 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDLIM1O00151 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM1O00151 AP004607.7-201ENST00000527152 1677 ntBASIC19.4■□□□□ 0.7
PDLIM1O00151 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM1O00151 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
PDLIM1O00151 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM1O00151 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM1O00151 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM1O00151 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.39■□□□□ 0.7
PDLIM1O00151 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM1O00151 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 NOC2LP1-202ENST00000452600 2235 ntBASIC19.39■□□□□ 0.69
PDLIM1O00151 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM1O00151 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms