Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
H3BM21 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
H3BM21 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
H3BM21 AL049796.1-201ENST00000565336 1766 ntBASIC20.37■□□□□ 0.85
H3BM21 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
H3BM21 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 MCRIP2P1-201ENST00000394346 511 ntBASIC20.37■□□□□ 0.85
H3BM21 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.37■□□□□ 0.85
H3BM21 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.37■□□□□ 0.85
H3BM21 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.37■□□□□ 0.85
H3BM21 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.37■□□□□ 0.85
H3BM21 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
H3BM21 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.37■□□□□ 0.85
H3BM21 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.37■□□□□ 0.85
H3BM21 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.37■□□□□ 0.85
H3BM21 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
H3BM21 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
H3BM21 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
H3BM21 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 AL355472.2-201ENST00000422958 438 ntBASIC20.36■□□□□ 0.85
H3BM21 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.36■□□□□ 0.85
H3BM21 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.36■□□□□ 0.85
H3BM21 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.36■□□□□ 0.85
H3BM21 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.36■□□□□ 0.85
H3BM21 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
H3BM21 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
H3BM21 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
H3BM21 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.36■□□□□ 0.85
H3BM21 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.35■□□□□ 0.85
H3BM21 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H3BM21 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
H3BM21 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H3BM21 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H3BM21 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H3BM21 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.35■□□□□ 0.85
H3BM21 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
H3BM21 AC008687.6-201ENST00000596318 630 ntBASIC20.35■□□□□ 0.85
H3BM21 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.35■□□□□ 0.85
H3BM21 KRT17P1-201ENST00000399211 1546 ntBASIC20.35■□□□□ 0.85
H3BM21 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
H3BM21 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.35■□□□□ 0.85
H3BM21 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
H3BM21 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
H3BM21 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
H3BM21 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.34■□□□□ 0.85
H3BM21 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.34■□□□□ 0.85
H3BM21 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
H3BM21 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
H3BM21 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.34■□□□□ 0.85
H3BM21 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
H3BM21 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
H3BM21 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
H3BM21 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3BM21 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3BM21 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3BM21 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3BM21 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3BM21 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3BM21 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H3BM21 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.33■□□□□ 0.85
H3BM21 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.33■□□□□ 0.85
H3BM21 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
H3BM21 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.33■□□□□ 0.84
H3BM21 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.33■□□□□ 0.84
H3BM21 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
H3BM21 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.32■□□□□ 0.84
H3BM21 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.32■□□□□ 0.84
H3BM21 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
H3BM21 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 PRORSD1P-201ENST00000295112 541 ntBASIC20.32■□□□□ 0.84
H3BM21 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3BM21 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms