Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VGLL3A8MV65 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VGLL3A8MV65 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VGLL3A8MV65 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
VGLL3A8MV65 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VGLL3A8MV65 AL390961.4-201ENST00000623958 2535 ntBASIC20.06■□□□□ 0.8
VGLL3A8MV65 AL162727.3-201ENST00000635661 2787 ntBASIC20.06■□□□□ 0.8
VGLL3A8MV65 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.06■□□□□ 0.8
VGLL3A8MV65 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VGLL3A8MV65 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VGLL3A8MV65 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VGLL3A8MV65 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.05■□□□□ 0.8
VGLL3A8MV65 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VGLL3A8MV65 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.05■□□□□ 0.8
VGLL3A8MV65 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VGLL3A8MV65 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VGLL3A8MV65 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.04■□□□□ 0.8
VGLL3A8MV65 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.03■□□□□ 0.8
VGLL3A8MV65 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VGLL3A8MV65 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.03■□□□□ 0.8
VGLL3A8MV65 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
VGLL3A8MV65 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
VGLL3A8MV65 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 ECEL1P2-201ENST00000461596 1295 ntBASIC20.03■□□□□ 0.8
VGLL3A8MV65 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 AL359258.2-201ENST00000564063 1566 ntBASIC20.03■□□□□ 0.8
VGLL3A8MV65 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VGLL3A8MV65 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
VGLL3A8MV65 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.02■□□□□ 0.8
VGLL3A8MV65 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.02■□□□□ 0.8
VGLL3A8MV65 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VGLL3A8MV65 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VGLL3A8MV65 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.02■□□□□ 0.8
VGLL3A8MV65 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.02■□□□□ 0.8
VGLL3A8MV65 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VGLL3A8MV65 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VGLL3A8MV65 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VGLL3A8MV65 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
VGLL3A8MV65 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.02■□□□□ 0.8
VGLL3A8MV65 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
VGLL3A8MV65 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VGLL3A8MV65 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VGLL3A8MV65 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VGLL3A8MV65 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
VGLL3A8MV65 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
VGLL3A8MV65 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
VGLL3A8MV65 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.01■□□□□ 0.79
VGLL3A8MV65 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.01■□□□□ 0.79
VGLL3A8MV65 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VGLL3A8MV65 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VGLL3A8MV65 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms