Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 AC027702.1-201ENST00000563810 1770 ntBASIC24.11■■□□□ 1.45
TMEM88BA6NKF7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 AP002982.1-201ENST00000492365 877 ntBASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM88BA6NKF7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 AC116562.2-201ENST00000507042 360 ntBASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 AC022616.7-201ENST00000525383 220 ntBASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM88BA6NKF7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 AK4P3-201ENST00000418260 669 ntBASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM88BA6NKF7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMEM88BA6NKF7 AC116050.2-201ENST00000612102 1779 ntBASIC24.08■■□□□ 1.44
TMEM88BA6NKF7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMEM88BA6NKF7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.08■■□□□ 1.44
TMEM88BA6NKF7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMEM88BA6NKF7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 AC009947.2-201ENST00000444014 672 ntBASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.07■■□□□ 1.44
TMEM88BA6NKF7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 AC020928.2-201ENST00000588717 2197 ntBASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 AC063952.2-201ENST00000498792 1227 ntBASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.06■■□□□ 1.44
TMEM88BA6NKF7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.05■■□□□ 1.44
TMEM88BA6NKF7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms