Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.83■□□□□ 0.93
TCRBV7S3A2A0A539 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV7S3A2A0A539 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV7S3A2A0A539 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TCRBV7S3A2A0A539 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TCRBV7S3A2A0A539 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TCRBV7S3A2A0A539 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 SMG8-203ENST00000578922 2178 ntBASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TCRBV7S3A2A0A539 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 AC091799.1-201ENST00000422823 811 ntBASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TCRBV7S3A2A0A539 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV7S3A2A0A539 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 RBM17P2-201ENST00000616397 1405 ntBASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.79■□□□□ 0.92
TCRBV7S3A2A0A539 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 KRT18P20-201ENST00000548986 1279 ntBASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 TCF3P1-201ENST00000423021 1937 ntBASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV7S3A2A0A539 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV7S3A2A0A539 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.77■□□□□ 0.92
TCRBV7S3A2A0A539 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV7S3A2A0A539 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV7S3A2A0A539 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TCRBV7S3A2A0A539 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms