Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 AC133552.2-202ENST00000575694 574 ntBASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 CYP21A1P-202ENST00000354927 1481 ntBASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC196A0A1B0GTZ2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 MCRIP2P1-201ENST00000394346 511 ntBASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 AL512625.2-201ENST00000417533 625 ntBASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC196A0A1B0GTZ2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 AC087633.2-202ENST00000565166 1439 ntBASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC196A0A1B0GTZ2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC196A0A1B0GTZ2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC196A0A1B0GTZ2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
CCDC196A0A1B0GTZ2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 KRT8P36-201ENST00000489121 1440 ntBASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 MIR663A-201ENST00000385250 93 ntBASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 CROCCP5-201ENST00000436658 830 ntBASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 AL121603.2-201ENST00000557373 2117 ntBASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC196A0A1B0GTZ2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms