Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 AL121829.2-201ENST00000620908 328 ntBASIC20.4■□□□□ 0.86
CCDC163A0A0D9SF12 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 FAM99A-202ENST00000538190 1989 ntBASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC163A0A0D9SF12 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC163A0A0D9SF12 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 AL355355.2-201ENST00000442321 338 ntBASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 KRT16P5-201ENST00000455284 522 ntBASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 AL445228.2-201ENST00000605589 952 ntBASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC163A0A0D9SF12 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 AF186192.3-201ENST00000583427 947 ntBASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC163A0A0D9SF12 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 AC080038.3-201ENST00000623346 1952 ntBASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC163A0A0D9SF12 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 AL590326.2-201ENST00000625139 305 ntBASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 AC092865.7-201ENST00000641832 219 ntBASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC163A0A0D9SF12 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC163A0A0D9SF12 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC163A0A0D9SF12 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC163A0A0D9SF12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms