Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 AC100791.3-201ENST00000617619 330 ntBASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV41A0A0B4J266 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 AC027702.1-201ENST00000563810 1770 ntBASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 MKRN4P-201ENST00000444706 1521 ntBASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 MCRIP2P1-201ENST00000394346 511 ntBASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 SLC29A4P1-201ENST00000398760 971 ntBASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 AC093787.1-201ENST00000450396 207 ntBASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 AC010980.2-201ENST00000587099 1412 ntBASIC16.11■□□□□ 0.17
TRAV41A0A0B4J266 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 CYP21A1P-202ENST00000354927 1481 ntBASIC16.1■□□□□ 0.17
TRAV41A0A0B4J266 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV41A0A0B4J266 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV41A0A0B4J266 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 AL109923.1-201ENST00000618799 583 ntBASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 AC087633.2-202ENST00000565166 1439 ntBASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV41A0A0B4J266 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms