Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC092720.2-201ENST00000602388 1665 ntBASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 AC120498.10-201ENST00000621827 505 ntBASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAV3A0A0B4J244 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV3A0A0B4J244 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 MIR638-201ENST00000385237 100 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L2-201ENST00000561772 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 AP001160.3-201ENST00000601484 763 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L6-201ENST00000626483 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L1-201ENST00000627662 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L8-201ENST00000629013 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L3-201ENST00000630187 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L7-201ENST00000630678 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DUX4L5-201ENST00000630834 1275 ntBASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV3A0A0B4J244 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV3A0A0B4J244 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 AC116050.2-201ENST00000612102 1779 ntBASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV3A0A0B4J244 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms