Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC016769.1-201ENST00000409132 1010 ntBASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 KRT18P11-201ENST00000435214 1283 ntBASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 DUX4L16-201ENST00000555130 1264 ntBASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AC016405.3-201ENST00000607710 860 ntBASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IGKV1D-43A0A0B4J1Z2 MIR935-201ENST00000401179 91 ntBASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CNN2P6-201ENST00000439038 900 ntBASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 CDV3P1-201ENST00000471403 739 ntBASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AC022517.1-201ENST00000592429 346 ntBASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PCDHAC2-203ENST00000615316 3011 ntBASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.08■□□□□ 0.48
IGKV1D-43A0A0B4J1Z2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms