Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC027612.3-201ENST00000413684 1047 ntBASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 SLC7A5P2-201ENST00000553010 536 ntBASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-3A0A0A0MS03 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 AC120498.10-201ENST00000621827 505 ntBASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-3A0A0A0MS03 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L2-201ENST00000561772 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L6-201ENST00000626483 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L1-201ENST00000627662 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L8-201ENST00000629013 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L3-201ENST00000630187 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L7-201ENST00000630678 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DUX4L5-201ENST00000630834 1275 ntBASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
TRBV5-3A0A0A0MS03 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.18■□□□□ 0.66
TRBV5-3A0A0A0MS03 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 KRT8P36-201ENST00000489121 1440 ntBASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 AC104187.1-201ENST00000607510 612 ntBASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV5-3A0A0A0MS03 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms