Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC11.42□□□□□ -0.582e-9■■□□□ 14.3
PRPF8Q6P2Q9 SERGEF-210ENST00000529151 898 ntTSL 311.35□□□□□ -0.593e-7■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-210ENST00000471169 492 ntTSL 311.04□□□□□ -0.642e-9■■□□□ 14.3
PRPF8Q6P2Q9 PDLIM7-212ENST00000504380 556 ntTSL 210.93□□□□□ -0.662e-9■■□□□ 14.3
PRPF8Q6P2Q9 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.672e-9■■□□□ 14.3
PRPF8Q6P2Q9 STK11IP-205ENST00000459692 854 ntTSL 510.87□□□□□ -0.671e-6■■□□□ 14.3
PRPF8Q6P2Q9 CSNK1D-206ENST00000577578 928 ntTSL 210.79□□□□□ -0.682e-17■■□□□ 14.3
PRPF8Q6P2Q9 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.692e-9■■□□□ 14.3
PRPF8Q6P2Q9 CHPF2-202ENST00000465601 782 ntTSL 310.53□□□□□ -0.722e-9■■□□□ 14.3
PRPF8Q6P2Q9 AC004832.3-203ENST00000439023 694 ntTSL 510.36□□□□□ -0.752e-9■■□□□ 14.3
PRPF8Q6P2Q9 AC004832.3-201ENST00000454552 872 ntTSL 210.36□□□□□ -0.752e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.762e-9■■□□□ 14.3
PRPF8Q6P2Q9 NFRKB-210ENST00000532147 581 ntTSL 310.25□□□□□ -0.772e-9■■□□□ 14.3
PRPF8Q6P2Q9 PDLIM7-214ENST00000505746 405 ntTSL 510.22□□□□□ -0.772e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-224ENST00000635156 2172 ntTSL 510.08□□□□□ -0.82e-9■■□□□ 14.3
PRPF8Q6P2Q9 RPL24-204ENST00000470961 572 ntTSL 29.64□□□□□ -0.872e-9■■□□□ 14.3
PRPF8Q6P2Q9 CBR4-205ENST00000507752 547 ntTSL 49.62□□□□□ -0.872e-9■■□□□ 14.3
PRPF8Q6P2Q9 STK11IP-208ENST00000468584 574 ntTSL 39.6□□□□□ -0.871e-6■■□□□ 14.3
PRPF8Q6P2Q9 PARP11-202ENST00000416739 2428 ntTSL 29.49□□□□□ -0.896e-8■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-209ENST00000466791 756 ntTSL 39.3□□□□□ -0.922e-9■■□□□ 14.3
PRPF8Q6P2Q9 CBR4-204ENST00000506808 562 ntTSL 48.99□□□□□ -0.972e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-202ENST00000371210 1041 ntTSL 2 BASIC8.63□□□□□ -1.032e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-207ENST00000430447 2485 ntTSL 28.43□□□□□ -1.062e-9■■□□□ 14.3
PRPF8Q6P2Q9 SERPINB6-203ENST00000380524 1495 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.12e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-222ENST00000634399 2455 ntTSL 58.14□□□□□ -1.112e-9■■□□□ 14.3
PRPF8Q6P2Q9 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.142e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-221ENST00000634364 5360 ntTSL 57.81□□□□□ -1.162e-9■■□□□ 14.3
PRPF8Q6P2Q9 SERPINB6-202ENST00000380520 3265 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.252e-9■■□□□ 14.3
PRPF8Q6P2Q9 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC7.26□□□□□ -1.256e-8■■□□□ 14.3
PRPF8Q6P2Q9 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.462e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-223ENST00000634606 4072 ntTSL 55.78□□□□□ -1.482e-9■■□□□ 14.3
PRPF8Q6P2Q9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.552e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-206ENST00000424725 4653 ntTSL 55.23□□□□□ -1.572e-9■■□□□ 14.3
PRPF8Q6P2Q9 RNF19A-207ENST00000520071 580 ntTSL 24.76□□□□□ -1.652e-9■■□□□ 14.3
PRPF8Q6P2Q9 PARP11-207ENST00000458162 4299 ntTSL 24.31□□□□□ -1.726e-8■■□□□ 14.3
PRPF8Q6P2Q9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.796e-8■■□□□ 14.3
PRPF8Q6P2Q9 PARP11-206ENST00000453942 1197 ntTSL 1 (best)3.63□□□□□ -1.836e-8■■□□□ 14.3
PRPF8Q6P2Q9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.832e-9■■□□□ 14.3
PRPF8Q6P2Q9 PRH1-203ENST00000538332 675 ntAPPRIS ALT2 TSL 53.48□□□□□ -1.852e-9■■□□□ 14.3
PRPF8Q6P2Q9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.58□□□□□ -26e-8■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-217ENST00000493891 669 ntTSL 21.97□□□□□ -2.092e-9■■□□□ 14.3
PRPF8Q6P2Q9 MICU3-204ENST00000519044 1130 ntAPPRIS ALT2 TSL 51.21□□□□□ -2.222e-9■■□□□ 14.3
PRPF8Q6P2Q9 RNF19A-214ENST00000523644 274 ntTSL 30.93□□□□□ -2.262e-9■■□□□ 14.3
PRPF8Q6P2Q9 FGGY-214ENST00000476939 623 ntTSL 3-0.42□□□□□ -2.482e-9■■□□□ 14.3
PRPF8Q6P2Q9 MICU3-203ENST00000517447 477 ntTSL 5-1.14□□□□□ -2.592e-9■■□□□ 14.3
PRPF8Q6P2Q9 NDRG1-220ENST00000521664 594 ntTSL 214.64□□□□□ -0.079e-9■■□□□ 14.3
PRPF8Q6P2Q9 GSE1-206ENST00000438180 1741 ntTSL 1 (best)13.24□□□□□ -0.297e-8■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-220ENST00000496411 1064 ntTSL 317.88■□□□□ 0.458e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-207ENST00000468455 644 ntTSL 515.1■□□□□ 0.018e-10■■□□□ 14.3
PRPF8Q6P2Q9 ZNF692-216ENST00000491971 805 ntTSL 211.1□□□□□ -0.638e-10■■□□□ 14.3
PRPF8Q6P2Q9 BAX-210ENST00000513217 869 ntTSL 212.26□□□□□ -0.452e-11■■□□□ 14.3
PRPF8Q6P2Q9 TSPAN4-218ENST00000529566 706 ntTSL 213.61□□□□□ -0.234e-9■■□□□ 14.3
PRPF8Q6P2Q9 MIGA2-202ENST00000414342 574 ntTSL 513.27□□□□□ -0.292e-8■■□□□ 14.3
PRPF8Q6P2Q9 MIGA2-206ENST00000471943 567 ntTSL 412.59□□□□□ -0.392e-8■■□□□ 14.3
PRPF8Q6P2Q9 TSPAN4-211ENST00000468468 2777 ntTSL 211.82□□□□□ -0.524e-9■■□□□ 14.3
PRPF8Q6P2Q9 PICALM-211ENST00000529016 757 ntTSL 33.22□□□□□ -1.895e-7■■□□□ 14.3
PRPF8Q6P2Q9 PICALM-212ENST00000529760 1153 ntTSL 51.57□□□□□ -2.165e-7■■□□□ 14.3
PRPF8Q6P2Q9 PICALM-213ENST00000530542 905 ntTSL 50.45□□□□□ -2.345e-7■■□□□ 14.3
PRPF8Q6P2Q9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.352e-6■■□□□ 14.3
PRPF8Q6P2Q9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.252e-6■■□□□ 14.3
PRPF8Q6P2Q9 RABGGTA-209ENST00000559551 2060 ntTSL 511.66□□□□□ -0.542e-6■■□□□ 14.3
PRPF8Q6P2Q9 RABGGTA-212ENST00000559974 1963 ntTSL 511.18□□□□□ -0.622e-6■■□□□ 14.3
PRPF8Q6P2Q9 RABGGTA-220ENST00000560998 1997 ntTSL 510.45□□□□□ -0.742e-6■■□□□ 14.3
PRPF8Q6P2Q9 RABGGTA-204ENST00000558376 1883 ntTSL 59.9□□□□□ -0.822e-6■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-209ENST00000420484 684 ntTSL 325.45■■□□□ 1.663e-7■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-211ENST00000467178 904 ntTSL 318.6■□□□□ 0.573e-7■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-221ENST00000488559 952 ntTSL 517.3■□□□□ 0.363e-7■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-223ENST00000491954 955 ntTSL 310.3□□□□□ -0.763e-9■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-202ENST00000324544 809 ntTSL 39.86□□□□□ -0.833e-7■■□□□ 14.3
PRPF8Q6P2Q9 CIZ1-224ENST00000498156 642 ntTSL 57.81□□□□□ -1.163e-9■■□□□ 14.3
PRPF8Q6P2Q9 MARS-222ENST00000551172 699 ntTSL 37.9□□□□□ -1.156e-8■■□□□ 14.3
PRPF8Q6P2Q9 MARS-229ENST00000552499 555 ntTSL 33.87□□□□□ -1.796e-8■■□□□ 14.3
PRPF8Q6P2Q9 MARS-209ENST00000547665 670 ntTSL 23.44□□□□□ -1.866e-8■■□□□ 14.3
PRPF8Q6P2Q9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.29e-9■■□□□ 14.3
PRPF8Q6P2Q9 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC9.4□□□□□ -0.99e-9■■□□□ 14.3
PRPF8Q6P2Q9 DCTN1-211ENST00000437375 598 ntTSL 417.26■□□□□ 0.352e-6■■□□□ 14.3
PRPF8Q6P2Q9 DCTN1-208ENST00000417090 556 ntTSL 414.7□□□□□ -0.062e-6■■□□□ 14.3
PRPF8Q6P2Q9 DCTN1-209ENST00000421392 542 ntTSL 414.13□□□□□ -0.152e-6■■□□□ 14.3
PRPF8Q6P2Q9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.53e-7■■□□□ 14.3
PRPF8Q6P2Q9 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.94■□□□□ 0.463e-7■■□□□ 14.3
PRPF8Q6P2Q9 TESC-203ENST00000470612 1057 ntTSL 216.91■□□□□ 0.33e-7■■□□□ 14.3
PRPF8Q6P2Q9 STAT5A-202ENST00000444283 515 ntTSL 420.33■□□□□ 0.855e-7■■□□□ 14.3
PRPF8Q6P2Q9 ULK1-207ENST00000544718 1678 ntTSL 220.28■□□□□ 0.842e-8■■□□□ 14.3
PRPF8Q6P2Q9 HDLBP-221ENST00000444092 598 ntTSL 28.85□□□□□ -0.992e-10■■□□□ 14.3
PRPF8Q6P2Q9 CTSH-206ENST00000528436 268 ntTSL 315.5■□□□□ 0.072e-6■■□□□ 14.3
PRPF8Q6P2Q9 TMTC4-206ENST00000462211 1278 ntTSL 1 (best)8.43□□□□□ -1.062e-6■■□□□ 14.3
PRPF8Q6P2Q9 F2-202ENST00000442468 1031 ntTSL 318.15■□□□□ 0.58e-11■■□□□ 14.3
PRPF8Q6P2Q9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.23□□□□□ -0.299e-9■■□□□ 14.3
PRPF8Q6P2Q9 PRSS21-210ENST00000577043 814 ntTSL 515.67■□□□□ 0.11e-6■■□□□ 14.3
PRPF8Q6P2Q9 OSBPL7-210ENST00000585051 614 ntTSL 216.94■□□□□ 0.31e-8■■□□□ 14.3
PRPF8Q6P2Q9 OSBPL7-206ENST00000580226 854 ntTSL 212.77□□□□□ -0.371e-8■■□□□ 14.3
PRPF8Q6P2Q9 KIAA0319L-212ENST00000473844 513 ntTSL 36.26□□□□□ -1.413e-7■■□□□ 14.3
PRPF8Q6P2Q9 SEMA4G-211ENST00000521006 4656 ntTSL 1 (best)11.08□□□□□ -0.646e-8■■□□□ 14.3
PRPF8Q6P2Q9 GDI1-213ENST00000489589 918 ntTSL 210.17□□□□□ -0.784e-13■■□□□ 14.3
PRPF8Q6P2Q9 GDI1-214ENST00000491154 4069 ntTSL 28.3□□□□□ -1.084e-13■■□□□ 14.3
PRPF8Q6P2Q9 SQSTM1-215ENST00000514093 842 ntTSL 518.09■□□□□ 0.494e-19■■□□□ 14.3
PRPF8Q6P2Q9 PGS1-202ENST00000585521 721 ntTSL 514.24□□□□□ -0.138e-7■■□□□ 14.3
PRPF8Q6P2Q9 STRN4-215ENST00000597063 570 ntTSL 415.3■□□□□ 0.042e-6■■□□□ 14.3
PRPF8Q6P2Q9 NCAPD2-209ENST00000539885 558 ntTSL 39.49□□□□□ -0.892e-7■■□□□ 14.3
PRPF8Q6P2Q9 ACADVL-228ENST00000582166 550 ntTSL 410.16□□□□□ -0.782e-9■■□□□ 14.3
Retrieved 100 of 73,762 protein–RNA pairs in 1488.5 ms