Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NHLRC3-203ENST00000470258 3298 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 AC011978.1-201ENST00000523386 1406 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 AC132825.3-201ENST00000562182 4710 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 RHBDD1-202ENST00000392062 5151 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 RNA5SP250-201ENST00000362534 119 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC9.5□□□□□ -0.89
MTHFRP42898 DSCR10-201ENST00000432141 860 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 AC068051.1-202ENST00000437883 543 ntTSL 4 BASIC9.5□□□□□ -0.89
MTHFRP42898 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 PCBP1-AS1-233ENST00000442326 668 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 RNA5SP460-201ENST00000516789 100 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 AC103769.1-201ENST00000518507 283 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 WTAPP1-203ENST00000537774 400 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 SLAMF1-204ENST00000538290 1087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC9.5□□□□□ -0.89
MTHFRP42898 AC087639.1-201ENST00000560974 920 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 GAPLINC-203ENST00000581029 613 ntTSL 3 BASIC9.5□□□□□ -0.89
MTHFRP42898 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 ZNF345-206ENST00000529555 3527 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 NPIPB6-202ENST00000533640 1329 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 AC012640.4-201ENST00000606194 2550 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 AC009502.1-201ENST00000607654 1965 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 LRRC37A4P-202ENST00000581296 5372 ntBASIC9.5□□□□□ -0.89
MTHFRP42898 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 AL353795.3-201ENST00000624351 5702 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 ANKRD20A21P-202ENST00000623715 3588 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 PCDH15-223ENST00000495484 1896 ntTSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 TNC-210ENST00000535648 7508 ntTSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 ADCY10P1-202ENST00000457653 3785 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC9.49□□□□□ -0.89
MTHFRP42898 RN7SL77P-201ENST00000473332 294 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 BX293995.1-201ENST00000502880 755 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 RPS20-204ENST00000519606 424 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 IGKV2OR22-4-201ENST00000523309 367 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 AC022880.2-201ENST00000532664 270 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 LINC02359-201ENST00000545642 643 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 AC078886.1-201ENST00000549144 554 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 OR4K16P-201ENST00000554603 969 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 AL049833.1-201ENST00000557745 840 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC9.49□□□□□ -0.89
MTHFRP42898 AC005552.1-201ENST00000577556 662 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 RN7SL49P-201ENST00000581392 298 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 RN7SL279P-201ENST00000582185 284 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC9.49□□□□□ -0.89
MTHFRP42898 AC233702.11-201ENST00000598588 333 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 CD209-211ENST00000602261 939 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.49□□□□□ -0.89
MTHFRP42898 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.49□□□□□ -0.89
MTHFRP42898 AC018521.7-201ENST00000580282 2927 ntBASIC9.49□□□□□ -0.89
MTHFRP42898 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC9.49□□□□□ -0.89
MTHFRP42898 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC9.49□□□□□ -0.89
MTHFRP42898 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
MTHFRP42898 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms