Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TTF1-203ENST00000612514 1780 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
MTHFRP42898 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
MTHFRP42898 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
MTHFRP42898 PLCE1-AS1-201ENST00000425267 1370 ntTSL 3 BASIC9.52□□□□□ -0.88
MTHFRP42898 EEF1A1P7-201ENST00000596811 1394 ntBASIC9.52□□□□□ -0.88
MTHFRP42898 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
MTHFRP42898 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
MTHFRP42898 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC9.52□□□□□ -0.89
MTHFRP42898 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC9.52□□□□□ -0.89
MTHFRP42898 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 UVSSA-201ENST00000324803 4441 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC9.52□□□□□ -0.89
MTHFRP42898 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC9.52□□□□□ -0.89
MTHFRP42898 AP002748.4-201ENST00000419755 3547 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
MTHFRP42898 FKBP1AP3-201ENST00000423650 319 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC9.52□□□□□ -0.89
MTHFRP42898 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC9.52□□□□□ -0.89
MTHFRP42898 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC9.52□□□□□ -0.89
MTHFRP42898 RN7SL130P-201ENST00000489463 305 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 SSR2-213ENST00000496742 825 ntTSL 3 BASIC9.52□□□□□ -0.89
MTHFRP42898 AC026704.1-201ENST00000506435 770 ntTSL 3 BASIC9.52□□□□□ -0.89
MTHFRP42898 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC9.52□□□□□ -0.89
MTHFRP42898 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 CNEP1R1-206ENST00000565556 1707 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 AC137527.1-201ENST00000565839 1261 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 RN7SL118P-201ENST00000580570 302 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC9.52□□□□□ -0.89
MTHFRP42898 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC9.52□□□□□ -0.89
MTHFRP42898 AC097478.3-201ENST00000620420 872 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 AP000720.2-201ENST00000623429 769 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 AC027045.2-201ENST00000634974 1571 ntTSL 5 BASIC9.52□□□□□ -0.89
MTHFRP42898 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 ANK2-216ENST00000510275 1770 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
MTHFRP42898 AC092620.3-201ENST00000562796 2764 ntBASIC9.52□□□□□ -0.89
MTHFRP42898 SYNJ1-206ENST00000433931 4852 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 ZFYVE26-209ENST00000557306 1533 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC091825.1-201ENST00000622952 2621 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 OR2AG2-201ENST00000338569 1069 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
MTHFRP42898 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 PSMB3P2-201ENST00000457237 618 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 AC104619.1-201ENST00000459634 631 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC106774.1-201ENST00000515105 321 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC9.51□□□□□ -0.89
MTHFRP42898 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 AL352977.1-201ENST00000553464 453 ntTSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC9.51□□□□□ -0.89
MTHFRP42898 PDLIM1P2-201ENST00000582923 607 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 AC018737.1-201ENST00000603900 204 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 AC022400.4-201ENST00000604613 286 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 AL136141.1-201ENST00000605780 369 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC215522.1-201ENST00000615488 446 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 ALG13-226ENST00000622986 582 ntTSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC9.51□□□□□ -0.89
MTHFRP42898 AL356234.2-201ENST00000637996 1160 ntTSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
MTHFRP42898 GRB2-204ENST00000392563 2851 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 NRXN1-212ENST00000412315 2215 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 TRPC3-201ENST00000264811 3675 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 HK1-206ENST00000448642 3868 ntTSL 5 BASIC9.51□□□□□ -0.89
MTHFRP42898 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
MTHFRP42898 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC9.51□□□□□ -0.89
MTHFRP42898 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC9.5□□□□□ -0.89
MTHFRP42898 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
MTHFRP42898 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC9.5□□□□□ -0.89
MTHFRP42898 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms