Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC9.36□□□□□ -0.91
SLC1A1P43005 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 CCT5P1-201ENST00000502314 1618 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 CH17-340M24.3-201ENST00000360656 598 ntTSL 2 BASIC9.36□□□□□ -0.91
SLC1A1P43005 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 BPIFA1-203ENST00000375422 1063 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 ACTG1P1-201ENST00000415794 1129 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC9.36□□□□□ -0.91
SLC1A1P43005 MRPS31P5-202ENST00000423686 920 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 KRT18P12-201ENST00000425245 1273 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 HNRNPCP9-201ENST00000426952 859 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC9.36□□□□□ -0.91
SLC1A1P43005 EPN2-AS1-201ENST00000451099 1190 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 PPP1R8P1-201ENST00000452549 1044 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 DNAJC9-AS1-202ENST00000457147 762 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 AP001464.1-201ENST00000457565 323 ntTSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC9.36□□□□□ -0.91
SLC1A1P43005 RN7SL397P-201ENST00000487309 298 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 CREM-237ENST00000488328 1049 ntTSL 2 BASIC9.36□□□□□ -0.91
SLC1A1P43005 NBPF22P-201ENST00000508988 1143 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC9.36□□□□□ -0.91
SLC1A1P43005 OR4A50P-201ENST00000526321 908 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 AP003122.1-201ENST00000527402 755 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC9.36□□□□□ -0.91
SLC1A1P43005 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC060814.2-201ENST00000556905 1089 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 AC127029.1-201ENST00000560822 237 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 AC244093.2-201ENST00000620102 524 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 SEM1-223ENST00000623498 582 ntTSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC244517.8-201ENST00000623995 467 ntTSL 4 BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC008870.5-201ENST00000624143 650 ntBASIC9.36□□□□□ -0.91
SLC1A1P43005 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC9.36□□□□□ -0.91
SLC1A1P43005 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC112512.1-201ENST00000398957 1428 ntTSL 2 BASIC9.36□□□□□ -0.91
SLC1A1P43005 RPGRIP1L-210ENST00000568653 2429 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SLC1A1P43005 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.36□□□□□ -0.91
SLC1A1P43005 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SLC1A1P43005 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SLC1A1P43005 LPA-202ENST00000447678 1839 ntTSL 5 BASIC9.35□□□□□ -0.91
SLC1A1P43005 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC9.35□□□□□ -0.91
SLC1A1P43005 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 TSSK4-202ENST00000339917 1321 ntAPPRIS ALT1 TSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 NR1H4-209ENST00000551379 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SLC1A1P43005 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
SLC1A1P43005 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 RNU1-28P-201ENST00000383861 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RNU1-27P-201ENST00000383869 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RNU1-1-201ENST00000383925 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RNVU1-18-201ENST00000384010 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RNU1-2-201ENST00000384278 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RNU1-4-201ENST00000384659 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RNU1-3-201ENST00000384782 164 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 MIR671-201ENST00000390183 118 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RAET1M-201ENST00000405282 596 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RN7SKP251-201ENST00000410830 314 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 PHKA1P1-201ENST00000420457 621 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 NPM1P12-201ENST00000423757 834 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 AL358976.1-201ENST00000437555 392 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 AL022313.2-201ENST00000442579 372 ntTSL 3 BASIC9.35□□□□□ -0.91
SLC1A1P43005 RPSAP76-201ENST00000444599 853 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC9.35□□□□□ -0.91
SLC1A1P43005 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC9.35□□□□□ -0.91
SLC1A1P43005 NBPF2P-201ENST00000453025 661 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 AL683842.1-201ENST00000455505 525 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 PGAM4-201ENST00000458128 765 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SLC1A1P43005 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC9.35□□□□□ -0.91
SLC1A1P43005 SNORA33.3-201ENST00000516236 136 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 RPS20-207ENST00000520627 423 ntTSL 5 BASIC9.35□□□□□ -0.91
SLC1A1P43005 AC023232.1-201ENST00000524963 285 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC9.35□□□□□ -0.91
SLC1A1P43005 TMEM126A-206ENST00000532180 643 ntTSL 3 BASIC9.35□□□□□ -0.91
SLC1A1P43005 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC9.35□□□□□ -0.91
SLC1A1P43005 NDUFA3P6-201ENST00000571486 250 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC9.35□□□□□ -0.91
SLC1A1P43005 MIR4327-201ENST00000581194 85 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 MIR2467-201ENST00000584559 81 ntBASIC9.35□□□□□ -0.91
SLC1A1P43005 LAMTOR5-AS1-211ENST00000598350 749 ntTSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 342.4 ms