Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SMAD2-205ENST00000586040 1971 ntTSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC009108.3-201ENST00000602739 3515 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AJ003147.3-201ENST00000622989 2199 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 GRSF1-203ENST00000502323 1794 ntTSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 ACTA2-201ENST00000224784 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 OR52E4-201ENST00000316987 1027 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 Z97985.1-201ENST00000332270 946 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 MORN3-201ENST00000355329 3803 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 GSTM2-203ENST00000369829 914 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC022400.5-201ENST00000415917 1031 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 ATP5G1P8-201ENST00000416294 294 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 OR9I2P-201ENST00000427941 903 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 PDCL3P6-201ENST00000429744 706 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 LINC01823-203ENST00000435895 766 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 LINC00333-201ENST00000446314 613 ntTSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 SLC25A15P2-201ENST00000457292 338 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 RPL10AP1-201ENST00000490023 643 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 RN7SL737P-201ENST00000490246 282 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC080188.1-201ENST00000491923 567 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC091180.2-203ENST00000507337 601 ntTSL 4 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 THAP6-211ENST00000507885 896 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC064862.6-201ENST00000511350 459 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 IGHVIV-44-1-201ENST00000519334 338 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 OR5BB1P-201ENST00000528843 939 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC090502.1-203ENST00000551726 554 ntTSL 4 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AL355922.3-201ENST00000556341 578 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC005972.1-201ENST00000581596 912 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 IGFL1P2-201ENST00000593820 330 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 RPS16-204ENST00000599539 555 ntTSL 2 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 HAR1B-202ENST00000608031 773 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AL138999.1-201ENST00000612824 501 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 AC105133.2-201ENST00000624158 461 ntBASIC8.37□□□□□ -1.07
SNX18Q96RF0 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 RSRC1-201ENST00000295930 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNX18Q96RF0 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SNX18Q96RF0 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AMD1-202ENST00000368877 1605 ntTSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC007614.6-201ENST00000623729 2620 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC112206.2-203ENST00000513234 1556 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNX18Q96RF0 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 RN7SKP246-201ENST00000364553 317 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 SEPT7P2-202ENST00000398921 823 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AL136226.1-201ENST00000401715 802 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 HSD52-201ENST00000425914 1111 ntTSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 OR13C6P-201ENST00000433495 950 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 GCNT1P3-201ENST00000450607 575 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC073551.1-201ENST00000450741 834 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC000067.1-201ENST00000452326 287 ntTSL 3 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 RPL7AP50-201ENST00000452821 795 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 HNRNPCP7-201ENST00000456056 905 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 RFKP2-201ENST00000464555 477 ntBASIC8.36□□□□□ -1.07
SNX18Q96RF0 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC8.36□□□□□ -1.07
SNX18Q96RF0 RPSAP74-201ENST00000522047 393 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms