Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC092373.1-201ENST00000414951 490 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC018866.1-202ENST00000421820 470 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 Z98048.1-201ENST00000424746 491 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 WT1-AS_7.1-201ENST00000426618 294 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC084809.1-201ENST00000435733 591 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC108488.1-205ENST00000438482 914 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AL355990.2-201ENST00000440688 508 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 RFTN1P1-201ENST00000442584 1033 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 LINC01186-201ENST00000446884 626 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC092634.3-201ENST00000450544 637 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC009945.1-201ENST00000453188 298 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 CTSLP4-201ENST00000454614 1002 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 RN7SL484P-201ENST00000462651 202 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC084398.1-201ENST00000494902 459 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC068305.3-201ENST00000547590 555 ntTSL 4 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC073863.1-201ENST00000550206 570 ntTSL 4 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC087564.1-201ENST00000569751 456 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC004080.4-201ENST00000602610 633 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 IGHV1OR15-6-201ENST00000603166 343 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 ELOCP33-201ENST00000603716 632 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 ALOX5AP-203ENST00000617770 1224 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AL118508.2-201ENST00000622708 673 ntTSL 3 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AL022329.3-201ENST00000624255 352 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 EIF4BP4-201ENST00000441847 1780 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC239859.1-201ENST00000449715 2594 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 SLC7A13-202ENST00000419776 1618 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 LINC01184-203ENST00000501652 1601 ntTSL 2 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNX18Q96RF0 LPAL2-205ENST00000639825 1536 ntTSL 5 BASIC8.39□□□□□ -1.07
SNX18Q96RF0 AC110926.1-201ENST00000412499 2825 ntBASIC8.39□□□□□ -1.07
SNX18Q96RF0 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 SGK1-211ENST00000475719 1383 ntTSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 CICP22-201ENST00000432801 1319 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 RNA5SP174-201ENST00000362702 118 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 TMEM252-201ENST00000377311 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 MIR711-201ENST00000390201 76 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AL355297.1-201ENST00000402808 388 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AL583835.2-203ENST00000407271 440 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 RN7SKP65-201ENST00000410278 313 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 TRGVA-201ENST00000413819 285 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AP000844.2-201ENST00000419440 509 ntTSL 4 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC011999.1-201ENST00000424794 1024 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC073188.1-201ENST00000442493 361 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 MYL6P1-201ENST00000449877 453 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 LINC01504-203ENST00000451596 671 ntTSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC006455.3-201ENST00000454641 333 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC093627.5-201ENST00000462565 662 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 RN7SKP241-201ENST00000464584 291 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC025572.1-201ENST00000472243 553 ntTSL 4 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 PFN1P9-201ENST00000475753 433 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 IBA57-AS1-202ENST00000496552 594 ntTSL 2 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 TMEM92-AS1-201ENST00000508851 750 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC025174.1-201ENST00000511758 295 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC023194.3-201ENST00000522679 277 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 LYNX1-207ENST00000523332 600 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 KRT18P59-201ENST00000524879 1231 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 AL354919.2-201ENST00000527035 537 ntTSL 4 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 FLVCR2-213ENST00000556856 1020 ntTSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 LINC00566-201ENST00000561557 570 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC005154.1-230ENST00000578994 644 ntTSL 4 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 AC243960.1-201ENST00000595649 661 ntTSL 5 BASIC8.38□□□□□ -1.07
SNX18Q96RF0 SQSTM1P1-201ENST00000603451 859 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 RN7SL462P-201ENST00000610302 261 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 RN7SL422P-201ENST00000612850 261 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 BSNDP1-201ENST00000613026 367 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 PHBP6-201ENST00000614021 786 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 CCL17-202ENST00000616880 550 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNX18Q96RF0 RN7SL343P-201ENST00000620904 261 ntBASIC8.38□□□□□ -1.07
SNX18Q96RF0 RN7SL640P-201ENST00000622591 261 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms